Gene : Solyc11g005490.1 S. lycopersicum ITAG2.4
Defline:  (1 of 20) PF02469 - Fasciclin domain (Fasciclin) Description:  Fasciclin-like arabinogalactan protein 18 (AHRD V1 *-*- A9XTM3_GOSHI); contains Interpro domain(s) IPR000782 FAS1 domain
Genomic Order:  50 Name:  ? Solyc11g005490.1
Secondary Identifier:  ? PAC:36152976
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g005490.1 0.5kb upstream 0.5kb upstream 1334 true SL2.50ch11: 382945-384278 Solanum lycopersicum
Solyc11g005490.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 382945-383444 Solanum lycopersicum
Solyc11g005490.1 0.5kb downstream 0.5kb downstream 1334 true SL2.50ch11: 383445-384778 Solanum lycopersicum
Solyc11g005490.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 384279-384778 Solanum lycopersicum
Solyc11g005490.1 1.0kb upstream 1.0kb upstream 1834 true SL2.50ch11: 382445-384278 Solanum lycopersicum
Solyc11g005490.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 382445-383444 Solanum lycopersicum
Solyc11g005490.1 1.0kb downstream 1.0kb downstream 1834 true SL2.50ch11: 383445-385278 Solanum lycopersicum
Solyc11g005490.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 384279-385278 Solanum lycopersicum
Solyc11g005490.1 2.0kb upstream 2.0kb upstream 2834 true SL2.50ch11: 381445-384278 Solanum lycopersicum
Solyc11g005490.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 381445-383444 Solanum lycopersicum
Solyc11g005490.1 2.0kb downstream 2.0kb downstream 2834 true SL2.50ch11: 383445-386278 Solanum lycopersicum
Solyc11g005490.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 384279-386278 Solanum lycopersicum
Solyc11g005490.1 5.0kb upstream 5.0kb upstream 5834 true SL2.50ch11: 378445-384278 Solanum lycopersicum
Solyc11g005490.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 378445-383444 Solanum lycopersicum
Solyc11g005490.1 5.0kb downstream 5.0kb downstream 5834 true SL2.50ch11: 383445-389278 Solanum lycopersicum
Solyc11g005490.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 384279-389278 Solanum lycopersicum
Solyc11g005490.1 10.0kb upstream 10.0kb upstream 10834 true SL2.50ch11: 373445-384278 Solanum lycopersicum
Solyc11g005490.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 373445-383444 Solanum lycopersicum
Solyc11g005490.1 10.0kb downstream 10.0kb downstream 10834 true SL2.50ch11: 383445-394278 Solanum lycopersicum
Solyc11g005490.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 384279-394278 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479738 5263 Asterids View MSA
123753187 5271 Pentapetalae View MSA
122794600 5272 Eudicot View MSA
122049688 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain