Gene : Solyc11g008890.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12608:SF4 - GDT1-LIKE PROTEIN 3 Description:  Predicted membrane protein (Fragment) (AHRD V1 **-- B9HJ03_POPTR); contains Interpro domain(s) IPR001727 Uncharacterised protein family UPF0016
Genomic Order:  387 Name:  ? Solyc11g008890.1
Secondary Identifier:  ? PAC:36151962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g008890.1 0.5kb upstream 0.5kb upstream 4879 true SL2.50ch11: 3059196-3064074 Solanum lycopersicum
Solyc11g008890.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 3063575-3064074 Solanum lycopersicum
Solyc11g008890.1 0.5kb downstream 0.5kb downstream 4879 true SL2.50ch11: 3058696-3063574 Solanum lycopersicum
Solyc11g008890.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 3058696-3059195 Solanum lycopersicum
Solyc11g008890.1 1.0kb upstream 1.0kb upstream 5379 true SL2.50ch11: 3059196-3064574 Solanum lycopersicum
Solyc11g008890.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 3063575-3064574 Solanum lycopersicum
Solyc11g008890.1 1.0kb downstream 1.0kb downstream 5379 true SL2.50ch11: 3058196-3063574 Solanum lycopersicum
Solyc11g008890.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 3058196-3059195 Solanum lycopersicum
Solyc11g008890.1 2.0kb upstream 2.0kb upstream 6379 true SL2.50ch11: 3059196-3065574 Solanum lycopersicum
Solyc11g008890.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 3063575-3065574 Solanum lycopersicum
Solyc11g008890.1 2.0kb downstream 2.0kb downstream 6379 true SL2.50ch11: 3057196-3063574 Solanum lycopersicum
Solyc11g008890.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 3057196-3059195 Solanum lycopersicum
Solyc11g008890.1 5.0kb upstream 5.0kb upstream 9379 true SL2.50ch11: 3059196-3068574 Solanum lycopersicum
Solyc11g008890.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 3063575-3068574 Solanum lycopersicum
Solyc11g008890.1 5.0kb downstream 5.0kb downstream 9379 true SL2.50ch11: 3054196-3063574 Solanum lycopersicum
Solyc11g008890.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 3054196-3059195 Solanum lycopersicum
Solyc11g008890.1 10.0kb upstream 10.0kb upstream 14379 true SL2.50ch11: 3059196-3073574 Solanum lycopersicum
Solyc11g008890.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 3063575-3073574 Solanum lycopersicum
Solyc11g008890.1 10.0kb downstream 10.0kb downstream 14379 true SL2.50ch11: 3049196-3063574 Solanum lycopersicum
Solyc11g008890.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 3049196-3059195 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479024 5263 Asterids View MSA
123740452 5271 Pentapetalae View MSA
122788674 5272 Eudicot View MSA
122047998 5273 Angiosperm View MSA
121345967 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain