Gene : Solyc11g008450.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10438:SF297 - THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC Description:  Thioredoxin family protein (AHRD V1 ***- D7LXH0_ARALY); contains Interpro domain(s) IPR013766 Thioredoxin domain
Genomic Order:  343 Name:  ? Solyc11g008450.1
Secondary Identifier:  ? PAC:36153119
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum THIOREDOX-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g008450.1 0.5kb upstream 0.5kb upstream 4441 true SL2.50ch11: 2650142-2654582 Solanum lycopersicum
Solyc11g008450.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 2650142-2650641 Solanum lycopersicum
Solyc11g008450.1 0.5kb downstream 0.5kb downstream 4441 true SL2.50ch11: 2650642-2655082 Solanum lycopersicum
Solyc11g008450.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 2654583-2655082 Solanum lycopersicum
Solyc11g008450.1 1.0kb upstream 1.0kb upstream 4941 true SL2.50ch11: 2649642-2654582 Solanum lycopersicum
Solyc11g008450.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 2649642-2650641 Solanum lycopersicum
Solyc11g008450.1 1.0kb downstream 1.0kb downstream 4941 true SL2.50ch11: 2650642-2655582 Solanum lycopersicum
Solyc11g008450.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 2654583-2655582 Solanum lycopersicum
Solyc11g008450.1 2.0kb upstream 2.0kb upstream 5941 true SL2.50ch11: 2648642-2654582 Solanum lycopersicum
Solyc11g008450.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 2648642-2650641 Solanum lycopersicum
Solyc11g008450.1 2.0kb downstream 2.0kb downstream 5941 true SL2.50ch11: 2650642-2656582 Solanum lycopersicum
Solyc11g008450.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 2654583-2656582 Solanum lycopersicum
Solyc11g008450.1 5.0kb upstream 5.0kb upstream 8941 true SL2.50ch11: 2645642-2654582 Solanum lycopersicum
Solyc11g008450.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 2645642-2650641 Solanum lycopersicum
Solyc11g008450.1 5.0kb downstream 5.0kb downstream 8941 true SL2.50ch11: 2650642-2659582 Solanum lycopersicum
Solyc11g008450.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 2654583-2659582 Solanum lycopersicum
Solyc11g008450.1 10.0kb upstream 10.0kb upstream 13941 true SL2.50ch11: 2640642-2654582 Solanum lycopersicum
Solyc11g008450.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 2640642-2650641 Solanum lycopersicum
Solyc11g008450.1 10.0kb downstream 10.0kb downstream 13941 true SL2.50ch11: 2650642-2664582 Solanum lycopersicum
Solyc11g008450.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 2654583-2664582 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467382 5263 Asterids View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain