Gene : Solyc11g008360.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 5.4.99.22 - 23S rRNA pseudouridine(2605) synthase Description:  Pseudouridine synthase family protein (AHRD V1 ***- D7LCF4_ARALY); contains Interpro domain(s) IPR006145 Pseudouridine synthase, RsuA and RluB/C/D/E/F
Genomic Order:  334 Name:  ? Solyc11g008360.1
Secondary Identifier:  ? PAC:36152255
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g008360.1 0.5kb upstream 0.5kb upstream 5402 true SL2.50ch11: 2570463-2575864 Solanum lycopersicum
Solyc11g008360.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 2575365-2575864 Solanum lycopersicum
Solyc11g008360.1 0.5kb downstream 0.5kb downstream 5402 true SL2.50ch11: 2569963-2575364 Solanum lycopersicum
Solyc11g008360.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 2569963-2570462 Solanum lycopersicum
Solyc11g008360.1 1.0kb upstream 1.0kb upstream 5902 true SL2.50ch11: 2570463-2576364 Solanum lycopersicum
Solyc11g008360.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 2575365-2576364 Solanum lycopersicum
Solyc11g008360.1 1.0kb downstream 1.0kb downstream 5902 true SL2.50ch11: 2569463-2575364 Solanum lycopersicum
Solyc11g008360.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 2569463-2570462 Solanum lycopersicum
Solyc11g008360.1 2.0kb upstream 2.0kb upstream 6902 true SL2.50ch11: 2570463-2577364 Solanum lycopersicum
Solyc11g008360.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 2575365-2577364 Solanum lycopersicum
Solyc11g008360.1 2.0kb downstream 2.0kb downstream 6902 true SL2.50ch11: 2568463-2575364 Solanum lycopersicum
Solyc11g008360.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 2568463-2570462 Solanum lycopersicum
Solyc11g008360.1 5.0kb upstream 5.0kb upstream 9902 true SL2.50ch11: 2570463-2580364 Solanum lycopersicum
Solyc11g008360.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 2575365-2580364 Solanum lycopersicum
Solyc11g008360.1 5.0kb downstream 5.0kb downstream 9902 true SL2.50ch11: 2565463-2575364 Solanum lycopersicum
Solyc11g008360.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 2565463-2570462 Solanum lycopersicum
Solyc11g008360.1 10.0kb upstream 10.0kb upstream 14902 true SL2.50ch11: 2570463-2585364 Solanum lycopersicum
Solyc11g008360.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 2575365-2585364 Solanum lycopersicum
Solyc11g008360.1 10.0kb downstream 10.0kb downstream 14902 true SL2.50ch11: 2560463-2575364 Solanum lycopersicum
Solyc11g008360.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 2560463-2570462 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466322 5263 Asterids View MSA
123747131 5271 Pentapetalae View MSA
122791737 5272 Eudicot View MSA
122046867 5273 Angiosperm View MSA
121350601 5274 Embryophyte View MSA
123427017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain