Gene : Solyc11g008680.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31155:SF4 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 1, CHLOROPLASTIC-RELATED Description:  Acyl- (AHRD V1 ***- Q4JIJ4_9ROSI); contains Interpro domain(s) IPR005067 Fatty acid desaturase, type 2
Genomic Order:  366 Name:  ? Solyc11g008680.1
Secondary Identifier:  ? PAC:36152960
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5147 Solanum lycopersicum pathologic  
Slycopersicum PWY-5156 Solanum lycopersicum pathologic  
Slycopersicum PWY-5366 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g008680.1 0.5kb upstream 0.5kb upstream 4639 true SL2.50ch11: 2859215-2863853 Solanum lycopersicum
Solyc11g008680.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 2859215-2859714 Solanum lycopersicum
Solyc11g008680.1 0.5kb downstream 0.5kb downstream 4639 true SL2.50ch11: 2859715-2864353 Solanum lycopersicum
Solyc11g008680.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 2863854-2864353 Solanum lycopersicum
Solyc11g008680.1 1.0kb upstream 1.0kb upstream 5139 true SL2.50ch11: 2858715-2863853 Solanum lycopersicum
Solyc11g008680.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 2858715-2859714 Solanum lycopersicum
Solyc11g008680.1 1.0kb downstream 1.0kb downstream 5139 true SL2.50ch11: 2859715-2864853 Solanum lycopersicum
Solyc11g008680.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 2863854-2864853 Solanum lycopersicum
Solyc11g008680.1 2.0kb upstream 2.0kb upstream 6139 true SL2.50ch11: 2857715-2863853 Solanum lycopersicum
Solyc11g008680.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 2857715-2859714 Solanum lycopersicum
Solyc11g008680.1 2.0kb downstream 2.0kb downstream 6139 true SL2.50ch11: 2859715-2865853 Solanum lycopersicum
Solyc11g008680.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 2863854-2865853 Solanum lycopersicum
Solyc11g008680.1 5.0kb upstream 5.0kb upstream 9139 true SL2.50ch11: 2854715-2863853 Solanum lycopersicum
Solyc11g008680.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 2854715-2859714 Solanum lycopersicum
Solyc11g008680.1 5.0kb downstream 5.0kb downstream 9139 true SL2.50ch11: 2859715-2868853 Solanum lycopersicum
Solyc11g008680.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 2863854-2868853 Solanum lycopersicum
Solyc11g008680.1 10.0kb upstream 10.0kb upstream 14139 true SL2.50ch11: 2849715-2863853 Solanum lycopersicum
Solyc11g008680.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 2849715-2859714 Solanum lycopersicum
Solyc11g008680.1 10.0kb downstream 10.0kb downstream 14139 true SL2.50ch11: 2859715-2873853 Solanum lycopersicum
Solyc11g008680.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 2863854-2873853 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121386257 5263 Asterids View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain