Gene : Solyc11g008780.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K01653 - acetolactate synthase I/III small subunit (E2.2.1.6S, ilvH, ilvN) Description:  Acetolactate synthase small subunit (AHRD V1 ***- Q9SMC2_NICPL); contains Interpro domain(s) IPR004789 Acetolactate synthase, small subunit
Genomic Order:  376 Name:  ? Solyc11g008780.1
Secondary Identifier:  ? PAC:36153632
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum BRANCHED-CHAIN-AA-SYN-PWY Solanum lycopersicum pathologic  
Slycopersicum ILEUSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3001 Solanum lycopersicum pathologic  
Slycopersicum VALSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g008780.1 0.5kb upstream 0.5kb upstream 7831 true SL2.50ch11: 2962362-2970192 Solanum lycopersicum
Solyc11g008780.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 2962362-2962861 Solanum lycopersicum
Solyc11g008780.1 0.5kb downstream 0.5kb downstream 7831 true SL2.50ch11: 2962862-2970692 Solanum lycopersicum
Solyc11g008780.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 2970193-2970692 Solanum lycopersicum
Solyc11g008780.1 1.0kb upstream 1.0kb upstream 8331 true SL2.50ch11: 2961862-2970192 Solanum lycopersicum
Solyc11g008780.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 2961862-2962861 Solanum lycopersicum
Solyc11g008780.1 1.0kb downstream 1.0kb downstream 8331 true SL2.50ch11: 2962862-2971192 Solanum lycopersicum
Solyc11g008780.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 2970193-2971192 Solanum lycopersicum
Solyc11g008780.1 2.0kb upstream 2.0kb upstream 9331 true SL2.50ch11: 2960862-2970192 Solanum lycopersicum
Solyc11g008780.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 2960862-2962861 Solanum lycopersicum
Solyc11g008780.1 2.0kb downstream 2.0kb downstream 9331 true SL2.50ch11: 2962862-2972192 Solanum lycopersicum
Solyc11g008780.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 2970193-2972192 Solanum lycopersicum
Solyc11g008780.1 5.0kb upstream 5.0kb upstream 12331 true SL2.50ch11: 2957862-2970192 Solanum lycopersicum
Solyc11g008780.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 2957862-2962861 Solanum lycopersicum
Solyc11g008780.1 5.0kb downstream 5.0kb downstream 12331 true SL2.50ch11: 2962862-2975192 Solanum lycopersicum
Solyc11g008780.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 2970193-2975192 Solanum lycopersicum
Solyc11g008780.1 10.0kb upstream 10.0kb upstream 17331 true SL2.50ch11: 2952862-2970192 Solanum lycopersicum
Solyc11g008780.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 2952862-2962861 Solanum lycopersicum
Solyc11g008780.1 10.0kb downstream 10.0kb downstream 17331 true SL2.50ch11: 2962862-2980192 Solanum lycopersicum
Solyc11g008780.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 2970193-2980192 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
121466535 5263 Asterids View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain