Gene : Solyc11g007080.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR21236:SF8 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Description:  YIPF5 (AHRD V1 **-- C0H9W5_SALSA); contains Interpro domain(s) IPR006977 Yip1 domain
Genomic Order:  207 Name:  ? Solyc11g007080.1
Secondary Identifier:  ? PAC:36152723
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g007080.1 0.5kb upstream 0.5kb upstream 2669 true SL2.50ch11: 1546571-1549239 Solanum lycopersicum
Solyc11g007080.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 1548740-1549239 Solanum lycopersicum
Solyc11g007080.1 0.5kb downstream 0.5kb downstream 2669 true SL2.50ch11: 1546071-1548739 Solanum lycopersicum
Solyc11g007080.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 1546071-1546570 Solanum lycopersicum
Solyc11g007080.1 1.0kb upstream 1.0kb upstream 3169 true SL2.50ch11: 1546571-1549739 Solanum lycopersicum
Solyc11g007080.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 1548740-1549739 Solanum lycopersicum
Solyc11g007080.1 1.0kb downstream 1.0kb downstream 3169 true SL2.50ch11: 1545571-1548739 Solanum lycopersicum
Solyc11g007080.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 1545571-1546570 Solanum lycopersicum
Solyc11g007080.1 2.0kb upstream 2.0kb upstream 4169 true SL2.50ch11: 1546571-1550739 Solanum lycopersicum
Solyc11g007080.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 1548740-1550739 Solanum lycopersicum
Solyc11g007080.1 2.0kb downstream 2.0kb downstream 4169 true SL2.50ch11: 1544571-1548739 Solanum lycopersicum
Solyc11g007080.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 1544571-1546570 Solanum lycopersicum
Solyc11g007080.1 5.0kb upstream 5.0kb upstream 7169 true SL2.50ch11: 1546571-1553739 Solanum lycopersicum
Solyc11g007080.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 1548740-1553739 Solanum lycopersicum
Solyc11g007080.1 5.0kb downstream 5.0kb downstream 7169 true SL2.50ch11: 1541571-1548739 Solanum lycopersicum
Solyc11g007080.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 1541571-1546570 Solanum lycopersicum
Solyc11g007080.1 10.0kb upstream 10.0kb upstream 12169 true SL2.50ch11: 1546571-1558739 Solanum lycopersicum
Solyc11g007080.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 1548740-1558739 Solanum lycopersicum
Solyc11g007080.1 10.0kb downstream 10.0kb downstream 12169 true SL2.50ch11: 1536571-1548739 Solanum lycopersicum
Solyc11g007080.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 1536571-1546570 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121385021 5263 Asterids View MSA
123751482 5271 Pentapetalae View MSA
122787116 5272 Eudicot View MSA
122046635 5273 Angiosperm View MSA
121346620 5274 Embryophyte View MSA
123427417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain