Gene : Solyc11g007590.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12419//PTHR12419:SF14 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Description:  OTU domain-containing protein 4 (AHRD V1 *-*- OTUD4_HUMAN); contains Interpro domain(s) IPR003323 Ovarian tumour, otubain
Genomic Order:  258 Name:  ? Solyc11g007590.1
Secondary Identifier:  ? PAC:36153588
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g007590.1 0.5kb upstream 0.5kb upstream 2671 true SL2.50ch11: 1849970-1852640 Solanum lycopersicum
Solyc11g007590.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 1849970-1850469 Solanum lycopersicum
Solyc11g007590.1 0.5kb downstream 0.5kb downstream 2671 true SL2.50ch11: 1850470-1853140 Solanum lycopersicum
Solyc11g007590.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 1852641-1853140 Solanum lycopersicum
Solyc11g007590.1 1.0kb upstream 1.0kb upstream 3171 true SL2.50ch11: 1849470-1852640 Solanum lycopersicum
Solyc11g007590.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 1849470-1850469 Solanum lycopersicum
Solyc11g007590.1 1.0kb downstream 1.0kb downstream 3171 true SL2.50ch11: 1850470-1853640 Solanum lycopersicum
Solyc11g007590.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 1852641-1853640 Solanum lycopersicum
Solyc11g007590.1 2.0kb upstream 2.0kb upstream 4171 true SL2.50ch11: 1848470-1852640 Solanum lycopersicum
Solyc11g007590.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 1848470-1850469 Solanum lycopersicum
Solyc11g007590.1 2.0kb downstream 2.0kb downstream 4171 true SL2.50ch11: 1850470-1854640 Solanum lycopersicum
Solyc11g007590.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 1852641-1854640 Solanum lycopersicum
Solyc11g007590.1 5.0kb upstream 5.0kb upstream 7171 true SL2.50ch11: 1845470-1852640 Solanum lycopersicum
Solyc11g007590.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 1845470-1850469 Solanum lycopersicum
Solyc11g007590.1 5.0kb downstream 5.0kb downstream 7171 true SL2.50ch11: 1850470-1857640 Solanum lycopersicum
Solyc11g007590.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 1852641-1857640 Solanum lycopersicum
Solyc11g007590.1 10.0kb upstream 10.0kb upstream 12171 true SL2.50ch11: 1840470-1852640 Solanum lycopersicum
Solyc11g007590.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 1840470-1850469 Solanum lycopersicum
Solyc11g007590.1 10.0kb downstream 10.0kb downstream 12171 true SL2.50ch11: 1850470-1862640 Solanum lycopersicum
Solyc11g007590.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 1852641-1862640 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466324 5263 Asterids View MSA
123749661 5271 Pentapetalae View MSA
122794711 5272 Eudicot View MSA
122048756 5273 Angiosperm View MSA
121349238 5274 Embryophyte View MSA
123428485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain