Gene : Solyc11g007580.1 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Description:  HhH-GPD family protein (AHRD V1 *--- D1CFH3_THET1); contains Interpro domain(s) IPR003265 HhH-GPD domain
Genomic Order:  257 Name:  ? Solyc11g007580.1
Secondary Identifier:  ? PAC:36151867
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g007580.1 0.5kb upstream 0.5kb upstream 9521 true SL2.50ch11: 1814235-1823755 Solanum lycopersicum
Solyc11g007580.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 1823256-1823755 Solanum lycopersicum
Solyc11g007580.1 0.5kb downstream 0.5kb downstream 9521 true SL2.50ch11: 1813735-1823255 Solanum lycopersicum
Solyc11g007580.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 1813735-1814234 Solanum lycopersicum
Solyc11g007580.1 1.0kb upstream 1.0kb upstream 10021 true SL2.50ch11: 1814235-1824255 Solanum lycopersicum
Solyc11g007580.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 1823256-1824255 Solanum lycopersicum
Solyc11g007580.1 1.0kb downstream 1.0kb downstream 10021 true SL2.50ch11: 1813235-1823255 Solanum lycopersicum
Solyc11g007580.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 1813235-1814234 Solanum lycopersicum
Solyc11g007580.1 2.0kb upstream 2.0kb upstream 11021 true SL2.50ch11: 1814235-1825255 Solanum lycopersicum
Solyc11g007580.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 1823256-1825255 Solanum lycopersicum
Solyc11g007580.1 2.0kb downstream 2.0kb downstream 11021 true SL2.50ch11: 1812235-1823255 Solanum lycopersicum
Solyc11g007580.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 1812235-1814234 Solanum lycopersicum
Solyc11g007580.1 5.0kb upstream 5.0kb upstream 14021 true SL2.50ch11: 1814235-1828255 Solanum lycopersicum
Solyc11g007580.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 1823256-1828255 Solanum lycopersicum
Solyc11g007580.1 5.0kb downstream 5.0kb downstream 14021 true SL2.50ch11: 1809235-1823255 Solanum lycopersicum
Solyc11g007580.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 1809235-1814234 Solanum lycopersicum
Solyc11g007580.1 10.0kb upstream 10.0kb upstream 19021 true SL2.50ch11: 1814235-1833255 Solanum lycopersicum
Solyc11g007580.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 1823256-1833255 Solanum lycopersicum
Solyc11g007580.1 10.0kb downstream 10.0kb downstream 19021 true SL2.50ch11: 1804235-1823255 Solanum lycopersicum
Solyc11g007580.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 1804235-1814234 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480512 5263 Asterids View MSA
123746757 5271 Pentapetalae View MSA
122794204 5272 Eudicot View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain