Gene : Solyc11g007570.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR20858:SF18 - PROTEIN PET18 Description:  Transcriptional activator (AHRD V1 ***- C3FFU8_BACTB); contains Interpro domain(s) IPR004305 TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C
Genomic Order:  256 Name:  ? Solyc11g007570.1
Secondary Identifier:  ? PAC:36152688
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g007570.1 0.5kb upstream 0.5kb upstream 3241 true SL2.50ch11: 1807264-1810504 Solanum lycopersicum
Solyc11g007570.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 1807264-1807763 Solanum lycopersicum
Solyc11g007570.1 0.5kb downstream 0.5kb downstream 3241 true SL2.50ch11: 1807764-1811004 Solanum lycopersicum
Solyc11g007570.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 1810505-1811004 Solanum lycopersicum
Solyc11g007570.1 1.0kb upstream 1.0kb upstream 3741 true SL2.50ch11: 1806764-1810504 Solanum lycopersicum
Solyc11g007570.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 1806764-1807763 Solanum lycopersicum
Solyc11g007570.1 1.0kb downstream 1.0kb downstream 3741 true SL2.50ch11: 1807764-1811504 Solanum lycopersicum
Solyc11g007570.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 1810505-1811504 Solanum lycopersicum
Solyc11g007570.1 2.0kb upstream 2.0kb upstream 4741 true SL2.50ch11: 1805764-1810504 Solanum lycopersicum
Solyc11g007570.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 1805764-1807763 Solanum lycopersicum
Solyc11g007570.1 2.0kb downstream 2.0kb downstream 4741 true SL2.50ch11: 1807764-1812504 Solanum lycopersicum
Solyc11g007570.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 1810505-1812504 Solanum lycopersicum
Solyc11g007570.1 5.0kb upstream 5.0kb upstream 7741 true SL2.50ch11: 1802764-1810504 Solanum lycopersicum
Solyc11g007570.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 1802764-1807763 Solanum lycopersicum
Solyc11g007570.1 5.0kb downstream 5.0kb downstream 7741 true SL2.50ch11: 1807764-1815504 Solanum lycopersicum
Solyc11g007570.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 1810505-1815504 Solanum lycopersicum
Solyc11g007570.1 10.0kb upstream 10.0kb upstream 12741 true SL2.50ch11: 1797764-1810504 Solanum lycopersicum
Solyc11g007570.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 1797764-1807763 Solanum lycopersicum
Solyc11g007570.1 10.0kb downstream 10.0kb downstream 12741 true SL2.50ch11: 1807764-1820504 Solanum lycopersicum
Solyc11g007570.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 1810505-1820504 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471172 5263 Asterids View MSA
123738905 5271 Pentapetalae View MSA
122790615 5272 Eudicot View MSA
122042801 5273 Angiosperm View MSA
121348004 5274 Embryophyte View MSA
123425587 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain