Gene : Solyc11g012740.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K15559 - regulator of Ty1 transposition protein 103 (RTT103) Description:  Regulation of nuclear pre-mRNA domain containing 1B (AHRD V1 *-*- B5DEK0_RAT); contains Interpro domain(s) IPR006903 Protein of unknown function DUF618
Genomic Order:  670 Name:  ? Solyc11g012740.1
Secondary Identifier:  ? PAC:36151892
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g012740.1 0.5kb upstream 0.5kb upstream 15387 true SL2.50ch11: 5494026-5509412 Solanum lycopersicum
Solyc11g012740.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 5508913-5509412 Solanum lycopersicum
Solyc11g012740.1 0.5kb downstream 0.5kb downstream 15387 true SL2.50ch11: 5493526-5508912 Solanum lycopersicum
Solyc11g012740.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 5493526-5494025 Solanum lycopersicum
Solyc11g012740.1 1.0kb upstream 1.0kb upstream 15887 true SL2.50ch11: 5494026-5509912 Solanum lycopersicum
Solyc11g012740.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 5508913-5509912 Solanum lycopersicum
Solyc11g012740.1 1.0kb downstream 1.0kb downstream 15887 true SL2.50ch11: 5493026-5508912 Solanum lycopersicum
Solyc11g012740.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 5493026-5494025 Solanum lycopersicum
Solyc11g012740.1 2.0kb upstream 2.0kb upstream 16887 true SL2.50ch11: 5494026-5510912 Solanum lycopersicum
Solyc11g012740.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 5508913-5510912 Solanum lycopersicum
Solyc11g012740.1 2.0kb downstream 2.0kb downstream 16887 true SL2.50ch11: 5492026-5508912 Solanum lycopersicum
Solyc11g012740.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 5492026-5494025 Solanum lycopersicum
Solyc11g012740.1 5.0kb upstream 5.0kb upstream 19887 true SL2.50ch11: 5494026-5513912 Solanum lycopersicum
Solyc11g012740.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 5508913-5513912 Solanum lycopersicum
Solyc11g012740.1 5.0kb downstream 5.0kb downstream 19887 true SL2.50ch11: 5489026-5508912 Solanum lycopersicum
Solyc11g012740.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 5489026-5494025 Solanum lycopersicum
Solyc11g012740.1 10.0kb upstream 10.0kb upstream 24887 true SL2.50ch11: 5494026-5518912 Solanum lycopersicum
Solyc11g012740.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 5508913-5518912 Solanum lycopersicum
Solyc11g012740.1 10.0kb downstream 10.0kb downstream 24887 true SL2.50ch11: 5484026-5508912 Solanum lycopersicum
Solyc11g012740.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 5484026-5494025 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475690 5263 Asterids View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain