Gene : Solyc11g012850.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K13600 - chlorophyllide a oxygenase (CAO) Description:  Chlorophyllide a oxygenase (AHRD V1 ***- B6TZB6_MAIZE); contains Interpro domain(s) IPR013626 Pheophorbide a oxygenase
Genomic Order:  681 Name:  ? Solyc11g012850.1
Secondary Identifier:  ? PAC:36153465
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5068 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g012850.1 0.5kb upstream 0.5kb upstream 4297 true SL2.50ch11: 5644237-5648533 Solanum lycopersicum
Solyc11g012850.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 5648034-5648533 Solanum lycopersicum
Solyc11g012850.1 0.5kb downstream 0.5kb downstream 4297 true SL2.50ch11: 5643737-5648033 Solanum lycopersicum
Solyc11g012850.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 5643737-5644236 Solanum lycopersicum
Solyc11g012850.1 1.0kb upstream 1.0kb upstream 4797 true SL2.50ch11: 5644237-5649033 Solanum lycopersicum
Solyc11g012850.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 5648034-5649033 Solanum lycopersicum
Solyc11g012850.1 1.0kb downstream 1.0kb downstream 4797 true SL2.50ch11: 5643237-5648033 Solanum lycopersicum
Solyc11g012850.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 5643237-5644236 Solanum lycopersicum
Solyc11g012850.1 2.0kb upstream 2.0kb upstream 5797 true SL2.50ch11: 5644237-5650033 Solanum lycopersicum
Solyc11g012850.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 5648034-5650033 Solanum lycopersicum
Solyc11g012850.1 2.0kb downstream 2.0kb downstream 5797 true SL2.50ch11: 5642237-5648033 Solanum lycopersicum
Solyc11g012850.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 5642237-5644236 Solanum lycopersicum
Solyc11g012850.1 5.0kb upstream 5.0kb upstream 8797 true SL2.50ch11: 5644237-5653033 Solanum lycopersicum
Solyc11g012850.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 5648034-5653033 Solanum lycopersicum
Solyc11g012850.1 5.0kb downstream 5.0kb downstream 8797 true SL2.50ch11: 5639237-5648033 Solanum lycopersicum
Solyc11g012850.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 5639237-5644236 Solanum lycopersicum
Solyc11g012850.1 10.0kb upstream 10.0kb upstream 13797 true SL2.50ch11: 5644237-5658033 Solanum lycopersicum
Solyc11g012850.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 5648034-5658033 Solanum lycopersicum
Solyc11g012850.1 10.0kb downstream 10.0kb downstream 13797 true SL2.50ch11: 5634237-5648033 Solanum lycopersicum
Solyc11g012850.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 5634237-5644236 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471834 5263 Asterids View MSA
123744269 5271 Pentapetalae View MSA
122787506 5272 Eudicot View MSA
122048070 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121348979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain