Gene : Solyc11g011470.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K03934 - NADH dehydrogenase (ubiquinone) Fe-S protein 1 (NDUFS1) Description:  NADH-ubiquinone oxidoreductase subunit (AHRD V1 ***- B9T118_RICCO); contains Interpro domain(s) IPR010228 NADH:ubiquinone oxidoreductase, subunit G
Genomic Order:  543 Name:  ? Solyc11g011470.1
Secondary Identifier:  ? PAC:36152404
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-3781 Solanum lycopersicum pathologic  
Slycopersicum PWY-4302 Solanum lycopersicum pathologic  
Slycopersicum PWY-5083 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g011470.1 0.5kb upstream 0.5kb upstream 6145 true SL2.50ch11: 4520459-4526603 Solanum lycopersicum
Solyc11g011470.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 4526104-4526603 Solanum lycopersicum
Solyc11g011470.1 0.5kb downstream 0.5kb downstream 6145 true SL2.50ch11: 4519959-4526103 Solanum lycopersicum
Solyc11g011470.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 4519959-4520458 Solanum lycopersicum
Solyc11g011470.1 1.0kb upstream 1.0kb upstream 6645 true SL2.50ch11: 4520459-4527103 Solanum lycopersicum
Solyc11g011470.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 4526104-4527103 Solanum lycopersicum
Solyc11g011470.1 1.0kb downstream 1.0kb downstream 6645 true SL2.50ch11: 4519459-4526103 Solanum lycopersicum
Solyc11g011470.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 4519459-4520458 Solanum lycopersicum
Solyc11g011470.1 2.0kb upstream 2.0kb upstream 7645 true SL2.50ch11: 4520459-4528103 Solanum lycopersicum
Solyc11g011470.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 4526104-4528103 Solanum lycopersicum
Solyc11g011470.1 2.0kb downstream 2.0kb downstream 7645 true SL2.50ch11: 4518459-4526103 Solanum lycopersicum
Solyc11g011470.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 4518459-4520458 Solanum lycopersicum
Solyc11g011470.1 5.0kb upstream 5.0kb upstream 10645 true SL2.50ch11: 4520459-4531103 Solanum lycopersicum
Solyc11g011470.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 4526104-4531103 Solanum lycopersicum
Solyc11g011470.1 5.0kb downstream 5.0kb downstream 10645 true SL2.50ch11: 4515459-4526103 Solanum lycopersicum
Solyc11g011470.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 4515459-4520458 Solanum lycopersicum
Solyc11g011470.1 10.0kb upstream 10.0kb upstream 15645 true SL2.50ch11: 4520459-4536103 Solanum lycopersicum
Solyc11g011470.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 4526104-4536103 Solanum lycopersicum
Solyc11g011470.1 10.0kb downstream 10.0kb downstream 15645 true SL2.50ch11: 4510459-4526103 Solanum lycopersicum
Solyc11g011470.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 4510459-4520458 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469069 5263 Asterids View MSA
123737847 5271 Pentapetalae View MSA
122786481 5272 Eudicot View MSA
122044121 5273 Angiosperm View MSA
121350903 5274 Embryophyte View MSA
123424434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain