Gene : Solyc11g010900.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.1.1.230 - 23S rRNA (adenosine(1067)-2'-O)-methyltransferase / Thiostrepton-resistance methylase Description:  RRNA methyltransferase (AHRD V1 ***- A4IRM5_GEOTN); contains Interpro domain(s) IPR001537 tRNA/rRNA methyltransferase, SpoU
Genomic Order:  487 Name:  ? Solyc11g010900.1
Secondary Identifier:  ? PAC:36153355
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g010900.1 0.5kb upstream 0.5kb upstream 3054 true SL2.50ch11: 3959714-3962767 Solanum lycopersicum
Solyc11g010900.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 3962268-3962767 Solanum lycopersicum
Solyc11g010900.1 0.5kb downstream 0.5kb downstream 3054 true SL2.50ch11: 3959214-3962267 Solanum lycopersicum
Solyc11g010900.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 3959214-3959713 Solanum lycopersicum
Solyc11g010900.1 1.0kb upstream 1.0kb upstream 3554 true SL2.50ch11: 3959714-3963267 Solanum lycopersicum
Solyc11g010900.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 3962268-3963267 Solanum lycopersicum
Solyc11g010900.1 1.0kb downstream 1.0kb downstream 3554 true SL2.50ch11: 3958714-3962267 Solanum lycopersicum
Solyc11g010900.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 3958714-3959713 Solanum lycopersicum
Solyc11g010900.1 2.0kb upstream 2.0kb upstream 4554 true SL2.50ch11: 3959714-3964267 Solanum lycopersicum
Solyc11g010900.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 3962268-3964267 Solanum lycopersicum
Solyc11g010900.1 2.0kb downstream 2.0kb downstream 4554 true SL2.50ch11: 3957714-3962267 Solanum lycopersicum
Solyc11g010900.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 3957714-3959713 Solanum lycopersicum
Solyc11g010900.1 5.0kb upstream 5.0kb upstream 7554 true SL2.50ch11: 3959714-3967267 Solanum lycopersicum
Solyc11g010900.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 3962268-3967267 Solanum lycopersicum
Solyc11g010900.1 5.0kb downstream 5.0kb downstream 7554 true SL2.50ch11: 3954714-3962267 Solanum lycopersicum
Solyc11g010900.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 3954714-3959713 Solanum lycopersicum
Solyc11g010900.1 10.0kb upstream 10.0kb upstream 12554 true SL2.50ch11: 3959714-3972267 Solanum lycopersicum
Solyc11g010900.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 3962268-3972267 Solanum lycopersicum
Solyc11g010900.1 10.0kb downstream 10.0kb downstream 12554 true SL2.50ch11: 3949714-3962267 Solanum lycopersicum
Solyc11g010900.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 3949714-3959713 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026352 5273 Angiosperm View MSA
121471228 5263 Asterids View MSA
123738926 5271 Pentapetalae View MSA
122787956 5272 Eudicot View MSA
121345763 5274 Embryophyte View MSA
123427917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain