Gene : Solyc11g017100.1 S. lycopersicum ITAG2.4
Defline:  (1 of 54) PF03514 - GRAS domain family (GRAS) Description:  GRAS family transcription factor (Fragment) (AHRD V1 **-- B1Q3B1_BRACM); contains Interpro domain(s) IPR005202 GRAS transcription factor
Genomic Order:  805 Name:  ? Solyc11g017100.1
Secondary Identifier:  ? PAC:36152947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g017100.1 0.5kb upstream 0.5kb upstream 1931 true SL2.50ch11: 7898735-7900665 Solanum lycopersicum
Solyc11g017100.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 7900166-7900665 Solanum lycopersicum
Solyc11g017100.1 0.5kb downstream 0.5kb downstream 1931 true SL2.50ch11: 7898235-7900165 Solanum lycopersicum
Solyc11g017100.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 7898235-7898734 Solanum lycopersicum
Solyc11g017100.1 1.0kb upstream 1.0kb upstream 2431 true SL2.50ch11: 7898735-7901165 Solanum lycopersicum
Solyc11g017100.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 7900166-7901165 Solanum lycopersicum
Solyc11g017100.1 1.0kb downstream 1.0kb downstream 2431 true SL2.50ch11: 7897735-7900165 Solanum lycopersicum
Solyc11g017100.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 7897735-7898734 Solanum lycopersicum
Solyc11g017100.1 2.0kb upstream 2.0kb upstream 3431 true SL2.50ch11: 7898735-7902165 Solanum lycopersicum
Solyc11g017100.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 7900166-7902165 Solanum lycopersicum
Solyc11g017100.1 2.0kb downstream 2.0kb downstream 3431 true SL2.50ch11: 7896735-7900165 Solanum lycopersicum
Solyc11g017100.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 7896735-7898734 Solanum lycopersicum
Solyc11g017100.1 5.0kb upstream 5.0kb upstream 6431 true SL2.50ch11: 7898735-7905165 Solanum lycopersicum
Solyc11g017100.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 7900166-7905165 Solanum lycopersicum
Solyc11g017100.1 5.0kb downstream 5.0kb downstream 6431 true SL2.50ch11: 7893735-7900165 Solanum lycopersicum
Solyc11g017100.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 7893735-7898734 Solanum lycopersicum
Solyc11g017100.1 10.0kb upstream 10.0kb upstream 11431 true SL2.50ch11: 7898735-7910165 Solanum lycopersicum
Solyc11g017100.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 7900166-7910165 Solanum lycopersicum
Solyc11g017100.1 10.0kb downstream 10.0kb downstream 11431 true SL2.50ch11: 7888735-7900165 Solanum lycopersicum
Solyc11g017100.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 7888735-7898734 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475232 5263 Asterids View MSA
123750317 5271 Pentapetalae View MSA
122794968 5272 Eudicot View MSA
122048642 5273 Angiosperm View MSA
121311053 5274 Embryophyte View MSA
123348407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain