Gene : Solyc11g040390.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K12524 - bifunctional aspartokinase / homoserine dehydrogenase 1 (thrA) Description:  Aspartokinase-homoserine dehydrogenase (AHRD V1 ***- O63067_SOYBN); contains Interpro domain(s) IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I
Genomic Order:  1480 Name:  ? Solyc11g040390.1
Secondary Identifier:  ? PAC:36152915
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum HOMOSERSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3001 Solanum lycopersicum pathologic  
Slycopersicum PWY-5097 Solanum lycopersicum pathologic  
Slycopersicum PWY-724 Solanum lycopersicum pathologic  
Slycopersicum THRESYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g040390.1 0.5kb upstream 0.5kb upstream 11479 true SL2.50ch11: 37715084-37726562 Solanum lycopersicum
Solyc11g040390.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 37715084-37715583 Solanum lycopersicum
Solyc11g040390.1 0.5kb downstream 0.5kb downstream 11479 true SL2.50ch11: 37715584-37727062 Solanum lycopersicum
Solyc11g040390.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 37726563-37727062 Solanum lycopersicum
Solyc11g040390.1 1.0kb upstream 1.0kb upstream 11979 true SL2.50ch11: 37714584-37726562 Solanum lycopersicum
Solyc11g040390.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 37714584-37715583 Solanum lycopersicum
Solyc11g040390.1 1.0kb downstream 1.0kb downstream 11979 true SL2.50ch11: 37715584-37727562 Solanum lycopersicum
Solyc11g040390.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 37726563-37727562 Solanum lycopersicum
Solyc11g040390.1 2.0kb upstream 2.0kb upstream 12979 true SL2.50ch11: 37713584-37726562 Solanum lycopersicum
Solyc11g040390.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 37713584-37715583 Solanum lycopersicum
Solyc11g040390.1 2.0kb downstream 2.0kb downstream 12979 true SL2.50ch11: 37715584-37728562 Solanum lycopersicum
Solyc11g040390.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 37726563-37728562 Solanum lycopersicum
Solyc11g040390.1 5.0kb upstream 5.0kb upstream 15979 true SL2.50ch11: 37710584-37726562 Solanum lycopersicum
Solyc11g040390.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 37710584-37715583 Solanum lycopersicum
Solyc11g040390.1 5.0kb downstream 5.0kb downstream 15979 true SL2.50ch11: 37715584-37731562 Solanum lycopersicum
Solyc11g040390.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 37726563-37731562 Solanum lycopersicum
Solyc11g040390.1 10.0kb upstream 10.0kb upstream 20979 true SL2.50ch11: 37705584-37726562 Solanum lycopersicum
Solyc11g040390.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 37705584-37715583 Solanum lycopersicum
Solyc11g040390.1 10.0kb downstream 10.0kb downstream 20979 true SL2.50ch11: 37715584-37736562 Solanum lycopersicum
Solyc11g040390.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 37726563-37736562 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028148 5273 Angiosperm View MSA
121371484 5263 Asterids Singleton cluster - no MSA
123756211 5271 Pentapetalae View MSA
122777380 5272 Eudicot View MSA
121297682 5274 Embryophyte View MSA
123335712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain