Gene : Solyc11g040140.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR31062:SF15 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Description:  Xyloglucan endotransglucosylase/hydrolase 5 (AHRD V1 ***- C0IRG4_ACTDE); contains Interpro domain(s) IPR016455 Xyloglucan endotransglucosylase/hydrolase
Genomic Order:  1502 Name:  ? Solyc11g040140.1
Secondary Identifier:  ? PAC:36152722
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g040140.1 0.5kb upstream 0.5kb upstream 3366 true SL2.50ch11: 39807936-39811301 Solanum lycopersicum
Solyc11g040140.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 39810802-39811301 Solanum lycopersicum
Solyc11g040140.1 0.5kb downstream 0.5kb downstream 3366 true SL2.50ch11: 39807436-39810801 Solanum lycopersicum
Solyc11g040140.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 39807436-39807935 Solanum lycopersicum
Solyc11g040140.1 1.0kb upstream 1.0kb upstream 3866 true SL2.50ch11: 39807936-39811801 Solanum lycopersicum
Solyc11g040140.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 39810802-39811801 Solanum lycopersicum
Solyc11g040140.1 1.0kb downstream 1.0kb downstream 3866 true SL2.50ch11: 39806936-39810801 Solanum lycopersicum
Solyc11g040140.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 39806936-39807935 Solanum lycopersicum
Solyc11g040140.1 2.0kb upstream 2.0kb upstream 4866 true SL2.50ch11: 39807936-39812801 Solanum lycopersicum
Solyc11g040140.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 39810802-39812801 Solanum lycopersicum
Solyc11g040140.1 2.0kb downstream 2.0kb downstream 4866 true SL2.50ch11: 39805936-39810801 Solanum lycopersicum
Solyc11g040140.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 39805936-39807935 Solanum lycopersicum
Solyc11g040140.1 5.0kb upstream 5.0kb upstream 7866 true SL2.50ch11: 39807936-39815801 Solanum lycopersicum
Solyc11g040140.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 39810802-39815801 Solanum lycopersicum
Solyc11g040140.1 5.0kb downstream 5.0kb downstream 7866 true SL2.50ch11: 39802936-39810801 Solanum lycopersicum
Solyc11g040140.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 39802936-39807935 Solanum lycopersicum
Solyc11g040140.1 10.0kb upstream 10.0kb upstream 12866 true SL2.50ch11: 39807936-39820801 Solanum lycopersicum
Solyc11g040140.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 39810802-39820801 Solanum lycopersicum
Solyc11g040140.1 10.0kb downstream 10.0kb downstream 12866 true SL2.50ch11: 39797936-39810801 Solanum lycopersicum
Solyc11g040140.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 39797936-39807935 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473527 5263 Asterids View MSA
123740091 5271 Pentapetalae View MSA
122795119 5272 Eudicot View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain