Gene : Solyc11g031970.1 S. lycopersicum ITAG2.4
Defline:  (1 of 19) PF01476 - LysM domain (LysM) Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR002482 Peptidoglycan-binding Lysin subgroup
Genomic Order:  1226 Name:  ? Solyc11g031970.1
Secondary Identifier:  ? PAC:36151910
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g031970.1 0.5kb upstream 0.5kb upstream 3965 true SL2.50ch11: 24277623-24281587 Solanum lycopersicum
Solyc11g031970.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 24277623-24278122 Solanum lycopersicum
Solyc11g031970.1 0.5kb downstream 0.5kb downstream 3965 true SL2.50ch11: 24278123-24282087 Solanum lycopersicum
Solyc11g031970.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 24281588-24282087 Solanum lycopersicum
Solyc11g031970.1 1.0kb upstream 1.0kb upstream 4465 true SL2.50ch11: 24277123-24281587 Solanum lycopersicum
Solyc11g031970.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 24277123-24278122 Solanum lycopersicum
Solyc11g031970.1 1.0kb downstream 1.0kb downstream 4465 true SL2.50ch11: 24278123-24282587 Solanum lycopersicum
Solyc11g031970.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 24281588-24282587 Solanum lycopersicum
Solyc11g031970.1 2.0kb upstream 2.0kb upstream 5465 true SL2.50ch11: 24276123-24281587 Solanum lycopersicum
Solyc11g031970.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 24276123-24278122 Solanum lycopersicum
Solyc11g031970.1 2.0kb downstream 2.0kb downstream 5465 true SL2.50ch11: 24278123-24283587 Solanum lycopersicum
Solyc11g031970.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 24281588-24283587 Solanum lycopersicum
Solyc11g031970.1 5.0kb upstream 5.0kb upstream 8465 true SL2.50ch11: 24273123-24281587 Solanum lycopersicum
Solyc11g031970.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 24273123-24278122 Solanum lycopersicum
Solyc11g031970.1 5.0kb downstream 5.0kb downstream 8465 true SL2.50ch11: 24278123-24286587 Solanum lycopersicum
Solyc11g031970.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 24281588-24286587 Solanum lycopersicum
Solyc11g031970.1 10.0kb upstream 10.0kb upstream 13465 true SL2.50ch11: 24268123-24281587 Solanum lycopersicum
Solyc11g031970.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 24268123-24278122 Solanum lycopersicum
Solyc11g031970.1 10.0kb downstream 10.0kb downstream 13465 true SL2.50ch11: 24278123-24291587 Solanum lycopersicum
Solyc11g031970.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 24281588-24291587 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414418 5263 Asterids View MSA
123739360 5271 Pentapetalae View MSA
122790807 5272 Eudicot View MSA
122048878 5273 Angiosperm View MSA
121349686 5274 Embryophyte View MSA
123381401 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain