Gene : Solyc11g031960.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Description:  GDSL esterase/lipase At1g33811 (AHRD V1 ***- GDL17_ARATH); contains Interpro domain(s) IPR001087 Lipase, GDSL
Genomic Order:  1225 Name:  ? Solyc11g031960.1
Secondary Identifier:  ? PAC:36153655
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPAS-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g031960.1 0.5kb upstream 0.5kb upstream 3013 true SL2.50ch11: 24137606-24140618 Solanum lycopersicum
Solyc11g031960.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 24140119-24140618 Solanum lycopersicum
Solyc11g031960.1 0.5kb downstream 0.5kb downstream 3013 true SL2.50ch11: 24137106-24140118 Solanum lycopersicum
Solyc11g031960.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 24137106-24137605 Solanum lycopersicum
Solyc11g031960.1 1.0kb upstream 1.0kb upstream 3513 true SL2.50ch11: 24137606-24141118 Solanum lycopersicum
Solyc11g031960.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 24140119-24141118 Solanum lycopersicum
Solyc11g031960.1 1.0kb downstream 1.0kb downstream 3513 true SL2.50ch11: 24136606-24140118 Solanum lycopersicum
Solyc11g031960.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 24136606-24137605 Solanum lycopersicum
Solyc11g031960.1 2.0kb upstream 2.0kb upstream 4513 true SL2.50ch11: 24137606-24142118 Solanum lycopersicum
Solyc11g031960.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 24140119-24142118 Solanum lycopersicum
Solyc11g031960.1 2.0kb downstream 2.0kb downstream 4513 true SL2.50ch11: 24135606-24140118 Solanum lycopersicum
Solyc11g031960.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 24135606-24137605 Solanum lycopersicum
Solyc11g031960.1 5.0kb upstream 5.0kb upstream 7513 true SL2.50ch11: 24137606-24145118 Solanum lycopersicum
Solyc11g031960.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 24140119-24145118 Solanum lycopersicum
Solyc11g031960.1 5.0kb downstream 5.0kb downstream 7513 true SL2.50ch11: 24132606-24140118 Solanum lycopersicum
Solyc11g031960.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 24132606-24137605 Solanum lycopersicum
Solyc11g031960.1 10.0kb upstream 10.0kb upstream 12513 true SL2.50ch11: 24137606-24150118 Solanum lycopersicum
Solyc11g031960.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 24140119-24150118 Solanum lycopersicum
Solyc11g031960.1 10.0kb downstream 10.0kb downstream 12513 true SL2.50ch11: 24127606-24140118 Solanum lycopersicum
Solyc11g031960.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 24127606-24137605 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468725 5263 Asterids View MSA
123737678 5271 Pentapetalae View MSA
122786109 5272 Eudicot View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain