Gene : Solyc11g027830.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23327:SF13 - ATP-DEPENDENT PROTEASE LA (LON) DOMAIN-CONTAINING PROTEIN Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR003111 Peptidase S16, lon N-terminal
Genomic Order:  1120 Name:  ? Solyc11g027830.1
Secondary Identifier:  ? PAC:36152990
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g027830.1 0.5kb upstream 0.5kb upstream 4350 true SL2.50ch11: 19000292-19004641 Solanum lycopersicum
Solyc11g027830.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 19000292-19000791 Solanum lycopersicum
Solyc11g027830.1 0.5kb downstream 0.5kb downstream 4350 true SL2.50ch11: 19000792-19005141 Solanum lycopersicum
Solyc11g027830.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 19004642-19005141 Solanum lycopersicum
Solyc11g027830.1 1.0kb upstream 1.0kb upstream 4850 true SL2.50ch11: 18999792-19004641 Solanum lycopersicum
Solyc11g027830.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 18999792-19000791 Solanum lycopersicum
Solyc11g027830.1 1.0kb downstream 1.0kb downstream 4850 true SL2.50ch11: 19000792-19005641 Solanum lycopersicum
Solyc11g027830.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 19004642-19005641 Solanum lycopersicum
Solyc11g027830.1 2.0kb upstream 2.0kb upstream 5850 true SL2.50ch11: 18998792-19004641 Solanum lycopersicum
Solyc11g027830.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 18998792-19000791 Solanum lycopersicum
Solyc11g027830.1 2.0kb downstream 2.0kb downstream 5850 true SL2.50ch11: 19000792-19006641 Solanum lycopersicum
Solyc11g027830.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 19004642-19006641 Solanum lycopersicum
Solyc11g027830.1 5.0kb upstream 5.0kb upstream 8850 true SL2.50ch11: 18995792-19004641 Solanum lycopersicum
Solyc11g027830.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 18995792-19000791 Solanum lycopersicum
Solyc11g027830.1 5.0kb downstream 5.0kb downstream 8850 true SL2.50ch11: 19000792-19009641 Solanum lycopersicum
Solyc11g027830.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 19004642-19009641 Solanum lycopersicum
Solyc11g027830.1 10.0kb upstream 10.0kb upstream 13850 true SL2.50ch11: 18990792-19004641 Solanum lycopersicum
Solyc11g027830.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 18990792-19000791 Solanum lycopersicum
Solyc11g027830.1 10.0kb downstream 10.0kb downstream 13850 true SL2.50ch11: 19000792-19014641 Solanum lycopersicum
Solyc11g027830.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 19004642-19014641 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029609 5273 Angiosperm View MSA
121475133 5263 Asterids View MSA
123741014 5271 Pentapetalae View MSA
122770000 5272 Eudicot View MSA
121347578 5274 Embryophyte View MSA
123425227 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain