Gene : Solyc11g062010.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR10799//PTHR10799:SF783 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED Description:  Chromodomain-helicase-DNA-binding protein 1 (AHRD V1 *--- CHD1_DROME); contains Interpro domain(s) IPR000330 SNF2-related
Genomic Order:  1656 Name:  ? Solyc11g062010.1
Secondary Identifier:  ? PAC:36152494
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g062010.1 0.5kb upstream 0.5kb upstream 29186 true SL2.50ch11: 48754303-48783488 Solanum lycopersicum
Solyc11g062010.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 48754303-48754802 Solanum lycopersicum
Solyc11g062010.1 0.5kb downstream 0.5kb downstream 29186 true SL2.50ch11: 48754803-48783988 Solanum lycopersicum
Solyc11g062010.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 48783489-48783988 Solanum lycopersicum
Solyc11g062010.1 1.0kb upstream 1.0kb upstream 29686 true SL2.50ch11: 48753803-48783488 Solanum lycopersicum
Solyc11g062010.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 48753803-48754802 Solanum lycopersicum
Solyc11g062010.1 1.0kb downstream 1.0kb downstream 29686 true SL2.50ch11: 48754803-48784488 Solanum lycopersicum
Solyc11g062010.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 48783489-48784488 Solanum lycopersicum
Solyc11g062010.1 2.0kb upstream 2.0kb upstream 30686 true SL2.50ch11: 48752803-48783488 Solanum lycopersicum
Solyc11g062010.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 48752803-48754802 Solanum lycopersicum
Solyc11g062010.1 2.0kb downstream 2.0kb downstream 30686 true SL2.50ch11: 48754803-48785488 Solanum lycopersicum
Solyc11g062010.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 48783489-48785488 Solanum lycopersicum
Solyc11g062010.1 5.0kb upstream 5.0kb upstream 33686 true SL2.50ch11: 48749803-48783488 Solanum lycopersicum
Solyc11g062010.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 48749803-48754802 Solanum lycopersicum
Solyc11g062010.1 5.0kb downstream 5.0kb downstream 33686 true SL2.50ch11: 48754803-48788488 Solanum lycopersicum
Solyc11g062010.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 48783489-48788488 Solanum lycopersicum
Solyc11g062010.1 10.0kb upstream 10.0kb upstream 38686 true SL2.50ch11: 48744803-48783488 Solanum lycopersicum
Solyc11g062010.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 48744803-48754802 Solanum lycopersicum
Solyc11g062010.1 10.0kb downstream 10.0kb downstream 38686 true SL2.50ch11: 48754803-48793488 Solanum lycopersicum
Solyc11g062010.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 48783489-48793488 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475783 5263 Asterids View MSA
123737195 5271 Pentapetalae View MSA
122791626 5272 Eudicot View MSA
122049865 5273 Angiosperm View MSA
121348487 5274 Embryophyte View MSA
123427983 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain