Gene : Solyc11g050770.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.3.1.54 - Formate C-acetyltransferase / Pyruvate formate-lyase Description:  Photosystem II reaction center protein Z (AHRD V1 ***- Q5IHA1_9SOLN); contains Interpro domain(s) IPR002644 Photosystem II protein PsbZ
Genomic Order:  1057 Name:  ? Solyc11g050770.1
Secondary Identifier:  ? PAC:36152367
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g050770.1 0.5kb upstream 0.5kb upstream 746 true SL2.50ch11: 16104088-16104833 Solanum lycopersicum
Solyc11g050770.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 16104334-16104833 Solanum lycopersicum
Solyc11g050770.1 0.5kb downstream 0.5kb downstream 746 true SL2.50ch11: 16103588-16104333 Solanum lycopersicum
Solyc11g050770.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 16103588-16104087 Solanum lycopersicum
Solyc11g050770.1 1.0kb upstream 1.0kb upstream 1246 true SL2.50ch11: 16104088-16105333 Solanum lycopersicum
Solyc11g050770.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 16104334-16105333 Solanum lycopersicum
Solyc11g050770.1 1.0kb downstream 1.0kb downstream 1246 true SL2.50ch11: 16103088-16104333 Solanum lycopersicum
Solyc11g050770.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 16103088-16104087 Solanum lycopersicum
Solyc11g050770.1 2.0kb upstream 2.0kb upstream 2246 true SL2.50ch11: 16104088-16106333 Solanum lycopersicum
Solyc11g050770.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 16104334-16106333 Solanum lycopersicum
Solyc11g050770.1 2.0kb downstream 2.0kb downstream 2246 true SL2.50ch11: 16102088-16104333 Solanum lycopersicum
Solyc11g050770.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 16102088-16104087 Solanum lycopersicum
Solyc11g050770.1 5.0kb upstream 5.0kb upstream 5246 true SL2.50ch11: 16104088-16109333 Solanum lycopersicum
Solyc11g050770.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 16104334-16109333 Solanum lycopersicum
Solyc11g050770.1 5.0kb downstream 5.0kb downstream 5246 true SL2.50ch11: 16099088-16104333 Solanum lycopersicum
Solyc11g050770.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 16099088-16104087 Solanum lycopersicum
Solyc11g050770.1 10.0kb upstream 10.0kb upstream 10246 true SL2.50ch11: 16104088-16114333 Solanum lycopersicum
Solyc11g050770.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 16104334-16114333 Solanum lycopersicum
Solyc11g050770.1 10.0kb downstream 10.0kb downstream 10246 true SL2.50ch11: 16094088-16104333 Solanum lycopersicum
Solyc11g050770.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 16094088-16104087 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028507 5273 Angiosperm View MSA
121371350 5263 Asterids Singleton cluster - no MSA
123752030 5271 Pentapetalae View MSA
122774318 5272 Eudicot View MSA
121349923 5274 Embryophyte View MSA
123381503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain