Gene : Solyc11g066730.1 S. lycopersicum ITAG2.4
Defline:  (1 of 31) PF03000 - NPH3 family (NPH3) Description:  Phototropic-responsive NPH3 family protein (AHRD V1 **-- D7KEU3_ARALY); contains Interpro domain(s) IPR004249 NPH3
Genomic Order:  1925 Name:  ? Solyc11g066730.1
Secondary Identifier:  ? PAC:36153764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g066730.1 0.5kb upstream 0.5kb upstream 6322 true SL2.50ch11: 52528094-52534415 Solanum lycopersicum
Solyc11g066730.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 52528094-52528593 Solanum lycopersicum
Solyc11g066730.1 0.5kb downstream 0.5kb downstream 6322 true SL2.50ch11: 52528594-52534915 Solanum lycopersicum
Solyc11g066730.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 52534416-52534915 Solanum lycopersicum
Solyc11g066730.1 1.0kb upstream 1.0kb upstream 6822 true SL2.50ch11: 52527594-52534415 Solanum lycopersicum
Solyc11g066730.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 52527594-52528593 Solanum lycopersicum
Solyc11g066730.1 1.0kb downstream 1.0kb downstream 6822 true SL2.50ch11: 52528594-52535415 Solanum lycopersicum
Solyc11g066730.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 52534416-52535415 Solanum lycopersicum
Solyc11g066730.1 2.0kb upstream 2.0kb upstream 7822 true SL2.50ch11: 52526594-52534415 Solanum lycopersicum
Solyc11g066730.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 52526594-52528593 Solanum lycopersicum
Solyc11g066730.1 2.0kb downstream 2.0kb downstream 7822 true SL2.50ch11: 52528594-52536415 Solanum lycopersicum
Solyc11g066730.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 52534416-52536415 Solanum lycopersicum
Solyc11g066730.1 5.0kb upstream 5.0kb upstream 10822 true SL2.50ch11: 52523594-52534415 Solanum lycopersicum
Solyc11g066730.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 52523594-52528593 Solanum lycopersicum
Solyc11g066730.1 5.0kb downstream 5.0kb downstream 10822 true SL2.50ch11: 52528594-52539415 Solanum lycopersicum
Solyc11g066730.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 52534416-52539415 Solanum lycopersicum
Solyc11g066730.1 10.0kb upstream 10.0kb upstream 15822 true SL2.50ch11: 52518594-52534415 Solanum lycopersicum
Solyc11g066730.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 52518594-52528593 Solanum lycopersicum
Solyc11g066730.1 10.0kb downstream 10.0kb downstream 15822 true SL2.50ch11: 52528594-52544415 Solanum lycopersicum
Solyc11g066730.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 52534416-52544415 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466610 5263 Asterids View MSA
123736594 5271 Pentapetalae View MSA
122785807 5272 Eudicot View MSA
122045563 5273 Angiosperm View MSA
121310465 5274 Embryophyte View MSA
123347939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain