Gene : Solyc11g066960.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.5.1.27//2.5.1.75 - Adenylate dimethylallyltransferase (AMP-dependent) / Isopentenyltransferase // tRNA dimethylallyltransferase / tRNA prenyltransferase Description:  tRNA dimethylallyltransferase (AHRD V1 ***- C5FRC3_NANOT); contains Interpro domain(s) IPR002627 tRNA isopentenyltransferase
Genomic Order:  1948 Name:  ? Solyc11g066960.1
Secondary Identifier:  ? PAC:36153076
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-2681 Solanum lycopersicum pathologic  
Slycopersicum PWY-2781 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g066960.1 0.5kb upstream 0.5kb upstream 7207 true SL2.50ch11: 52742206-52749412 Solanum lycopersicum
Solyc11g066960.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 52748913-52749412 Solanum lycopersicum
Solyc11g066960.1 0.5kb downstream 0.5kb downstream 7207 true SL2.50ch11: 52741706-52748912 Solanum lycopersicum
Solyc11g066960.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 52741706-52742205 Solanum lycopersicum
Solyc11g066960.1 1.0kb upstream 1.0kb upstream 7707 true SL2.50ch11: 52742206-52749912 Solanum lycopersicum
Solyc11g066960.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 52748913-52749912 Solanum lycopersicum
Solyc11g066960.1 1.0kb downstream 1.0kb downstream 7707 true SL2.50ch11: 52741206-52748912 Solanum lycopersicum
Solyc11g066960.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 52741206-52742205 Solanum lycopersicum
Solyc11g066960.1 2.0kb upstream 2.0kb upstream 8707 true SL2.50ch11: 52742206-52750912 Solanum lycopersicum
Solyc11g066960.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 52748913-52750912 Solanum lycopersicum
Solyc11g066960.1 2.0kb downstream 2.0kb downstream 8707 true SL2.50ch11: 52740206-52748912 Solanum lycopersicum
Solyc11g066960.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 52740206-52742205 Solanum lycopersicum
Solyc11g066960.1 5.0kb upstream 5.0kb upstream 11707 true SL2.50ch11: 52742206-52753912 Solanum lycopersicum
Solyc11g066960.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 52748913-52753912 Solanum lycopersicum
Solyc11g066960.1 5.0kb downstream 5.0kb downstream 11707 true SL2.50ch11: 52737206-52748912 Solanum lycopersicum
Solyc11g066960.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 52737206-52742205 Solanum lycopersicum
Solyc11g066960.1 10.0kb upstream 10.0kb upstream 16707 true SL2.50ch11: 52742206-52758912 Solanum lycopersicum
Solyc11g066960.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 52748913-52758912 Solanum lycopersicum
Solyc11g066960.1 10.0kb downstream 10.0kb downstream 16707 true SL2.50ch11: 52732206-52748912 Solanum lycopersicum
Solyc11g066960.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 52732206-52742205 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475007 5263 Asterids View MSA
123740850 5271 Pentapetalae View MSA
122786758 5272 Eudicot View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain