Gene : Solyc11g066040.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Description:  U-box domain-containing protein 13 (AHRD V1 **-- PUB13_ARATH); contains Interpro domain(s) IPR011989 Armadillo-like helical
Genomic Order:  1856 Name:  ? Solyc11g066040.1
Secondary Identifier:  ? PAC:36153416
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g066040.1 0.5kb upstream 0.5kb upstream 7987 true SL2.50ch11: 51712501-51720487 Solanum lycopersicum
Solyc11g066040.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 51712501-51713000 Solanum lycopersicum
Solyc11g066040.1 0.5kb downstream 0.5kb downstream 7987 true SL2.50ch11: 51713001-51720987 Solanum lycopersicum
Solyc11g066040.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 51720488-51720987 Solanum lycopersicum
Solyc11g066040.1 1.0kb upstream 1.0kb upstream 8487 true SL2.50ch11: 51712001-51720487 Solanum lycopersicum
Solyc11g066040.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 51712001-51713000 Solanum lycopersicum
Solyc11g066040.1 1.0kb downstream 1.0kb downstream 8487 true SL2.50ch11: 51713001-51721487 Solanum lycopersicum
Solyc11g066040.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 51720488-51721487 Solanum lycopersicum
Solyc11g066040.1 2.0kb upstream 2.0kb upstream 9487 true SL2.50ch11: 51711001-51720487 Solanum lycopersicum
Solyc11g066040.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 51711001-51713000 Solanum lycopersicum
Solyc11g066040.1 2.0kb downstream 2.0kb downstream 9487 true SL2.50ch11: 51713001-51722487 Solanum lycopersicum
Solyc11g066040.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 51720488-51722487 Solanum lycopersicum
Solyc11g066040.1 5.0kb upstream 5.0kb upstream 12487 true SL2.50ch11: 51708001-51720487 Solanum lycopersicum
Solyc11g066040.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 51708001-51713000 Solanum lycopersicum
Solyc11g066040.1 5.0kb downstream 5.0kb downstream 12487 true SL2.50ch11: 51713001-51725487 Solanum lycopersicum
Solyc11g066040.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 51720488-51725487 Solanum lycopersicum
Solyc11g066040.1 10.0kb upstream 10.0kb upstream 17487 true SL2.50ch11: 51703001-51720487 Solanum lycopersicum
Solyc11g066040.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 51703001-51713000 Solanum lycopersicum
Solyc11g066040.1 10.0kb downstream 10.0kb downstream 17487 true SL2.50ch11: 51713001-51730487 Solanum lycopersicum
Solyc11g066040.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 51720488-51730487 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
121466522 5263 Asterids View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain