Gene : Solyc11g066390.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Description:  Superoxide dismutase (AHRD V1 ***- Q7XAV2_SOLLC); contains Interpro domain(s) IPR018152 Superoxide dismutase, copper/zinc, binding site
Genomic Order:  1891 Name:  ? Solyc11g066390.1
Secondary Identifier:  ? PAC:36152934
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum DETOX1-PWY Solanum lycopersicum pathologic  
Slycopersicum DETOX1-PWY-1 Solanum lycopersicum pathologic  
Slycopersicum PWY-6854 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g066390.1 0.5kb upstream 0.5kb upstream 5820 true SL2.50ch11: 52162132-52167951 Solanum lycopersicum
Solyc11g066390.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 52162132-52162631 Solanum lycopersicum
Solyc11g066390.1 0.5kb downstream 0.5kb downstream 5820 true SL2.50ch11: 52162632-52168451 Solanum lycopersicum
Solyc11g066390.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 52167952-52168451 Solanum lycopersicum
Solyc11g066390.1 1.0kb upstream 1.0kb upstream 6320 true SL2.50ch11: 52161632-52167951 Solanum lycopersicum
Solyc11g066390.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 52161632-52162631 Solanum lycopersicum
Solyc11g066390.1 1.0kb downstream 1.0kb downstream 6320 true SL2.50ch11: 52162632-52168951 Solanum lycopersicum
Solyc11g066390.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 52167952-52168951 Solanum lycopersicum
Solyc11g066390.1 2.0kb upstream 2.0kb upstream 7320 true SL2.50ch11: 52160632-52167951 Solanum lycopersicum
Solyc11g066390.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 52160632-52162631 Solanum lycopersicum
Solyc11g066390.1 2.0kb downstream 2.0kb downstream 7320 true SL2.50ch11: 52162632-52169951 Solanum lycopersicum
Solyc11g066390.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 52167952-52169951 Solanum lycopersicum
Solyc11g066390.1 5.0kb upstream 5.0kb upstream 10320 true SL2.50ch11: 52157632-52167951 Solanum lycopersicum
Solyc11g066390.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 52157632-52162631 Solanum lycopersicum
Solyc11g066390.1 5.0kb downstream 5.0kb downstream 10320 true SL2.50ch11: 52162632-52172951 Solanum lycopersicum
Solyc11g066390.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 52167952-52172951 Solanum lycopersicum
Solyc11g066390.1 10.0kb upstream 10.0kb upstream 15320 true SL2.50ch11: 52152632-52167951 Solanum lycopersicum
Solyc11g066390.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 52152632-52162631 Solanum lycopersicum
Solyc11g066390.1 10.0kb downstream 10.0kb downstream 15320 true SL2.50ch11: 52162632-52177951 Solanum lycopersicum
Solyc11g066390.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 52167952-52177951 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467710 5263 Asterids View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain