Gene : Solyc11g063610.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K02256 - cytochrome c oxidase subunit 1 (COX1) Description:  Cytochrome c oxidase subunit 1 (AHRD V1 **** Q70G75_9SOLN); contains Interpro domain(s) IPR000883 Cytochrome c oxidase, subunit I
Genomic Order:  1716 Name:  ? Solyc11g063610.1
Secondary Identifier:  ? PAC:36151868
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-3781 Solanum lycopersicum pathologic  
Slycopersicum PWY-7279 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g063610.1 0.5kb upstream 0.5kb upstream 1994 true SL2.50ch11: 49640212-49642205 Solanum lycopersicum
Solyc11g063610.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 49640212-49640711 Solanum lycopersicum
Solyc11g063610.1 0.5kb downstream 0.5kb downstream 1994 true SL2.50ch11: 49640712-49642705 Solanum lycopersicum
Solyc11g063610.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 49642206-49642705 Solanum lycopersicum
Solyc11g063610.1 1.0kb upstream 1.0kb upstream 2494 true SL2.50ch11: 49639712-49642205 Solanum lycopersicum
Solyc11g063610.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 49639712-49640711 Solanum lycopersicum
Solyc11g063610.1 1.0kb downstream 1.0kb downstream 2494 true SL2.50ch11: 49640712-49643205 Solanum lycopersicum
Solyc11g063610.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 49642206-49643205 Solanum lycopersicum
Solyc11g063610.1 2.0kb upstream 2.0kb upstream 3494 true SL2.50ch11: 49638712-49642205 Solanum lycopersicum
Solyc11g063610.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 49638712-49640711 Solanum lycopersicum
Solyc11g063610.1 2.0kb downstream 2.0kb downstream 3494 true SL2.50ch11: 49640712-49644205 Solanum lycopersicum
Solyc11g063610.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 49642206-49644205 Solanum lycopersicum
Solyc11g063610.1 5.0kb upstream 5.0kb upstream 6494 true SL2.50ch11: 49635712-49642205 Solanum lycopersicum
Solyc11g063610.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 49635712-49640711 Solanum lycopersicum
Solyc11g063610.1 5.0kb downstream 5.0kb downstream 6494 true SL2.50ch11: 49640712-49647205 Solanum lycopersicum
Solyc11g063610.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 49642206-49647205 Solanum lycopersicum
Solyc11g063610.1 10.0kb upstream 10.0kb upstream 11494 true SL2.50ch11: 49630712-49642205 Solanum lycopersicum
Solyc11g063610.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 49630712-49640711 Solanum lycopersicum
Solyc11g063610.1 10.0kb downstream 10.0kb downstream 11494 true SL2.50ch11: 49640712-49652205 Solanum lycopersicum
Solyc11g063610.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 49642206-49652205 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026781 5273 Angiosperm View MSA
121482944 5263 Asterids View MSA
123750940 5271 Pentapetalae View MSA
122794080 5272 Eudicot View MSA
121348518 5274 Embryophyte View MSA
123380893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain