Gene : Solyc11g063600.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11700:SF7 - 40S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL Description:  30S Ribosomal protein S10 (AHRD V1 ***- Q055E5_LEPBL); contains Interpro domain(s) IPR005731 Ribosomal protein S10, bacterial
Genomic Order:  1715 Name:  ? Solyc11g063600.1
Secondary Identifier:  ? PAC:36153217
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g063600.1 0.5kb upstream 0.5kb upstream 1695 true SL2.50ch11: 49638769-49640463 Solanum lycopersicum
Solyc11g063600.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 49638769-49639268 Solanum lycopersicum
Solyc11g063600.1 0.5kb downstream 0.5kb downstream 1695 true SL2.50ch11: 49639269-49640963 Solanum lycopersicum
Solyc11g063600.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 49640464-49640963 Solanum lycopersicum
Solyc11g063600.1 1.0kb upstream 1.0kb upstream 2195 true SL2.50ch11: 49638269-49640463 Solanum lycopersicum
Solyc11g063600.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 49638269-49639268 Solanum lycopersicum
Solyc11g063600.1 1.0kb downstream 1.0kb downstream 2195 true SL2.50ch11: 49639269-49641463 Solanum lycopersicum
Solyc11g063600.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 49640464-49641463 Solanum lycopersicum
Solyc11g063600.1 2.0kb upstream 2.0kb upstream 3195 true SL2.50ch11: 49637269-49640463 Solanum lycopersicum
Solyc11g063600.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 49637269-49639268 Solanum lycopersicum
Solyc11g063600.1 2.0kb downstream 2.0kb downstream 3195 true SL2.50ch11: 49639269-49642463 Solanum lycopersicum
Solyc11g063600.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 49640464-49642463 Solanum lycopersicum
Solyc11g063600.1 5.0kb upstream 5.0kb upstream 6195 true SL2.50ch11: 49634269-49640463 Solanum lycopersicum
Solyc11g063600.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 49634269-49639268 Solanum lycopersicum
Solyc11g063600.1 5.0kb downstream 5.0kb downstream 6195 true SL2.50ch11: 49639269-49645463 Solanum lycopersicum
Solyc11g063600.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 49640464-49645463 Solanum lycopersicum
Solyc11g063600.1 10.0kb upstream 10.0kb upstream 11195 true SL2.50ch11: 49629269-49640463 Solanum lycopersicum
Solyc11g063600.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 49629269-49639268 Solanum lycopersicum
Solyc11g063600.1 10.0kb downstream 10.0kb downstream 11195 true SL2.50ch11: 49639269-49650463 Solanum lycopersicum
Solyc11g063600.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 49640464-49650463 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028495 5273 Angiosperm View MSA
121371556 5263 Asterids Singleton cluster - no MSA
123744881 5271 Pentapetalae View MSA
122794709 5272 Eudicot View MSA
121348119 5274 Embryophyte View MSA
123380732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain