Gene : Solyc11g065070.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10277:SF40 - PROTEIN Y71G12B.10 Description:  Hydroxymethylglutaryl-CoA lyase (AHRD V1 ***- B6U7B9_MAIZE); contains Interpro domain(s) IPR000891 Pyruvate carboxyltransferase
Genomic Order:  1763 Name:  ? Solyc11g065070.1
Secondary Identifier:  ? PAC:36151759
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LEU-DEG2-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g065070.1 0.5kb upstream 0.5kb upstream 4670 true SL2.50ch11: 50369918-50374587 Solanum lycopersicum
Solyc11g065070.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 50369918-50370417 Solanum lycopersicum
Solyc11g065070.1 0.5kb downstream 0.5kb downstream 4670 true SL2.50ch11: 50370418-50375087 Solanum lycopersicum
Solyc11g065070.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 50374588-50375087 Solanum lycopersicum
Solyc11g065070.1 1.0kb upstream 1.0kb upstream 5170 true SL2.50ch11: 50369418-50374587 Solanum lycopersicum
Solyc11g065070.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 50369418-50370417 Solanum lycopersicum
Solyc11g065070.1 1.0kb downstream 1.0kb downstream 5170 true SL2.50ch11: 50370418-50375587 Solanum lycopersicum
Solyc11g065070.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 50374588-50375587 Solanum lycopersicum
Solyc11g065070.1 2.0kb upstream 2.0kb upstream 6170 true SL2.50ch11: 50368418-50374587 Solanum lycopersicum
Solyc11g065070.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 50368418-50370417 Solanum lycopersicum
Solyc11g065070.1 2.0kb downstream 2.0kb downstream 6170 true SL2.50ch11: 50370418-50376587 Solanum lycopersicum
Solyc11g065070.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 50374588-50376587 Solanum lycopersicum
Solyc11g065070.1 5.0kb upstream 5.0kb upstream 9170 true SL2.50ch11: 50365418-50374587 Solanum lycopersicum
Solyc11g065070.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 50365418-50370417 Solanum lycopersicum
Solyc11g065070.1 5.0kb downstream 5.0kb downstream 9170 true SL2.50ch11: 50370418-50379587 Solanum lycopersicum
Solyc11g065070.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 50374588-50379587 Solanum lycopersicum
Solyc11g065070.1 10.0kb upstream 10.0kb upstream 14170 true SL2.50ch11: 50360418-50374587 Solanum lycopersicum
Solyc11g065070.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 50360418-50370417 Solanum lycopersicum
Solyc11g065070.1 10.0kb downstream 10.0kb downstream 14170 true SL2.50ch11: 50370418-50384587 Solanum lycopersicum
Solyc11g065070.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 50374588-50384587 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472143 5263 Asterids View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain