Gene : Solyc11g071660.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13087 - NF-KAPPA B ACTIVATING PROTEIN Description:  NF-kappa-B-activating protein (AHRD V1 *--- NKAP_HUMAN); contains Interpro domain(s) IPR009269 Protein of unknown function DUF926
Genomic Order:  2220 Name:  ? Solyc11g071660.1
Secondary Identifier:  ? PAC:36152052
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g071660.1 0.5kb upstream 0.5kb upstream 2108 true SL2.50ch11: 55070867-55072974 Solanum lycopersicum
Solyc11g071660.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 55072475-55072974 Solanum lycopersicum
Solyc11g071660.1 0.5kb downstream 0.5kb downstream 2108 true SL2.50ch11: 55070367-55072474 Solanum lycopersicum
Solyc11g071660.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 55070367-55070866 Solanum lycopersicum
Solyc11g071660.1 1.0kb upstream 1.0kb upstream 2608 true SL2.50ch11: 55070867-55073474 Solanum lycopersicum
Solyc11g071660.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 55072475-55073474 Solanum lycopersicum
Solyc11g071660.1 1.0kb downstream 1.0kb downstream 2608 true SL2.50ch11: 55069867-55072474 Solanum lycopersicum
Solyc11g071660.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 55069867-55070866 Solanum lycopersicum
Solyc11g071660.1 2.0kb upstream 2.0kb upstream 3608 true SL2.50ch11: 55070867-55074474 Solanum lycopersicum
Solyc11g071660.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 55072475-55074474 Solanum lycopersicum
Solyc11g071660.1 2.0kb downstream 2.0kb downstream 3608 true SL2.50ch11: 55068867-55072474 Solanum lycopersicum
Solyc11g071660.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 55068867-55070866 Solanum lycopersicum
Solyc11g071660.1 5.0kb upstream 5.0kb upstream 6608 true SL2.50ch11: 55070867-55077474 Solanum lycopersicum
Solyc11g071660.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 55072475-55077474 Solanum lycopersicum
Solyc11g071660.1 5.0kb downstream 5.0kb downstream 6608 true SL2.50ch11: 55065867-55072474 Solanum lycopersicum
Solyc11g071660.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 55065867-55070866 Solanum lycopersicum
Solyc11g071660.1 10.0kb upstream 10.0kb upstream 11608 true SL2.50ch11: 55070867-55082474 Solanum lycopersicum
Solyc11g071660.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 55072475-55082474 Solanum lycopersicum
Solyc11g071660.1 10.0kb downstream 10.0kb downstream 11608 true SL2.50ch11: 55060867-55072474 Solanum lycopersicum
Solyc11g071660.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 55060867-55070866 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473260 5263 Asterids View MSA
123739958 5271 Pentapetalae View MSA
122786035 5272 Eudicot View MSA
122046016 5273 Angiosperm View MSA
121348345 5274 Embryophyte View MSA
123426799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain