Gene : Solyc11g069500.1 S. lycopersicum ITAG2.4
Defline:  (1 of 10) PF02362//PF06507 - B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Description:  Auxin response factor 16 (AHRD V1 ***- D9IVB4_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Genomic Order:  2103 Name:  ? Solyc11g069500.1
Secondary Identifier:  ? PAC:36151821
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g069500.1 0.5kb upstream 0.5kb upstream 3636 true SL2.50ch11: 54104934-54108569 Solanum lycopersicum
Solyc11g069500.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 54108070-54108569 Solanum lycopersicum
Solyc11g069500.1 0.5kb downstream 0.5kb downstream 3636 true SL2.50ch11: 54104434-54108069 Solanum lycopersicum
Solyc11g069500.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 54104434-54104933 Solanum lycopersicum
Solyc11g069500.1 1.0kb upstream 1.0kb upstream 4136 true SL2.50ch11: 54104934-54109069 Solanum lycopersicum
Solyc11g069500.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 54108070-54109069 Solanum lycopersicum
Solyc11g069500.1 1.0kb downstream 1.0kb downstream 4136 true SL2.50ch11: 54103934-54108069 Solanum lycopersicum
Solyc11g069500.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 54103934-54104933 Solanum lycopersicum
Solyc11g069500.1 2.0kb upstream 2.0kb upstream 5136 true SL2.50ch11: 54104934-54110069 Solanum lycopersicum
Solyc11g069500.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 54108070-54110069 Solanum lycopersicum
Solyc11g069500.1 2.0kb downstream 2.0kb downstream 5136 true SL2.50ch11: 54102934-54108069 Solanum lycopersicum
Solyc11g069500.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 54102934-54104933 Solanum lycopersicum
Solyc11g069500.1 5.0kb upstream 5.0kb upstream 8136 true SL2.50ch11: 54104934-54113069 Solanum lycopersicum
Solyc11g069500.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 54108070-54113069 Solanum lycopersicum
Solyc11g069500.1 5.0kb downstream 5.0kb downstream 8136 true SL2.50ch11: 54099934-54108069 Solanum lycopersicum
Solyc11g069500.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 54099934-54104933 Solanum lycopersicum
Solyc11g069500.1 10.0kb upstream 10.0kb upstream 13136 true SL2.50ch11: 54104934-54118069 Solanum lycopersicum
Solyc11g069500.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 54108070-54118069 Solanum lycopersicum
Solyc11g069500.1 10.0kb downstream 10.0kb downstream 13136 true SL2.50ch11: 54094934-54108069 Solanum lycopersicum
Solyc11g069500.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 54094934-54104933 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478252 5263 Asterids View MSA
123753762 5271 Pentapetalae View MSA
122789105 5272 Eudicot View MSA
122049915 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain