Gene : Solyc11g068870.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K13206 - coiled-coil domain-containing protein 55 (CCDC55) Description:  Coiled-coil domain containing 55 (AHRD V1 ***- B6TD70_MAIZE); contains Interpro domain(s) IPR018612 Protein of unknown function DUF2040, coiled-coil
Genomic Order:  2040 Name:  ? Solyc11g068870.1
Secondary Identifier:  ? PAC:36152544
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g068870.1 0.5kb upstream 0.5kb upstream 4253 true SL2.50ch11: 53449811-53454063 Solanum lycopersicum
Solyc11g068870.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 53449811-53450310 Solanum lycopersicum
Solyc11g068870.1 0.5kb downstream 0.5kb downstream 4253 true SL2.50ch11: 53450311-53454563 Solanum lycopersicum
Solyc11g068870.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 53454064-53454563 Solanum lycopersicum
Solyc11g068870.1 1.0kb upstream 1.0kb upstream 4753 true SL2.50ch11: 53449311-53454063 Solanum lycopersicum
Solyc11g068870.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 53449311-53450310 Solanum lycopersicum
Solyc11g068870.1 1.0kb downstream 1.0kb downstream 4753 true SL2.50ch11: 53450311-53455063 Solanum lycopersicum
Solyc11g068870.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 53454064-53455063 Solanum lycopersicum
Solyc11g068870.1 2.0kb upstream 2.0kb upstream 5753 true SL2.50ch11: 53448311-53454063 Solanum lycopersicum
Solyc11g068870.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 53448311-53450310 Solanum lycopersicum
Solyc11g068870.1 2.0kb downstream 2.0kb downstream 5753 true SL2.50ch11: 53450311-53456063 Solanum lycopersicum
Solyc11g068870.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 53454064-53456063 Solanum lycopersicum
Solyc11g068870.1 5.0kb upstream 5.0kb upstream 8753 true SL2.50ch11: 53445311-53454063 Solanum lycopersicum
Solyc11g068870.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 53445311-53450310 Solanum lycopersicum
Solyc11g068870.1 5.0kb downstream 5.0kb downstream 8753 true SL2.50ch11: 53450311-53459063 Solanum lycopersicum
Solyc11g068870.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 53454064-53459063 Solanum lycopersicum
Solyc11g068870.1 10.0kb upstream 10.0kb upstream 13753 true SL2.50ch11: 53440311-53454063 Solanum lycopersicum
Solyc11g068870.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 53440311-53450310 Solanum lycopersicum
Solyc11g068870.1 10.0kb downstream 10.0kb downstream 13753 true SL2.50ch11: 53450311-53464063 Solanum lycopersicum
Solyc11g068870.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 53454064-53464063 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474283 5263 Asterids View MSA
123748299 5271 Pentapetalae View MSA
122787989 5272 Eudicot View MSA
122042336 5273 Angiosperm View MSA
121346143 5274 Embryophyte View MSA
123426491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain