Gene : Solyc11g068830.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Description:  Orotidine 5&apos-phosphate decarboxylase (Orotate phosphoribosyltransferase) (AHRD V1 **** C4QAV6_SCHMA); contains Interpro domain(s) IPR001754 Orotidine 5'-phosphate decarboxylase, core
Genomic Order:  2036 Name:  ? Solyc11g068830.1
Secondary Identifier:  ? PAC:36152921
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-162 Solanum lycopersicum pathologic  
Slycopersicum PWY-5686 Solanum lycopersicum pathologic  
Slycopersicum PWY-7211 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g068830.1 0.5kb upstream 0.5kb upstream 5216 true SL2.50ch11: 53435655-53440870 Solanum lycopersicum
Solyc11g068830.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 53435655-53436154 Solanum lycopersicum
Solyc11g068830.1 0.5kb downstream 0.5kb downstream 5216 true SL2.50ch11: 53436155-53441370 Solanum lycopersicum
Solyc11g068830.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 53440871-53441370 Solanum lycopersicum
Solyc11g068830.1 1.0kb upstream 1.0kb upstream 5716 true SL2.50ch11: 53435155-53440870 Solanum lycopersicum
Solyc11g068830.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 53435155-53436154 Solanum lycopersicum
Solyc11g068830.1 1.0kb downstream 1.0kb downstream 5716 true SL2.50ch11: 53436155-53441870 Solanum lycopersicum
Solyc11g068830.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 53440871-53441870 Solanum lycopersicum
Solyc11g068830.1 2.0kb upstream 2.0kb upstream 6716 true SL2.50ch11: 53434155-53440870 Solanum lycopersicum
Solyc11g068830.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 53434155-53436154 Solanum lycopersicum
Solyc11g068830.1 2.0kb downstream 2.0kb downstream 6716 true SL2.50ch11: 53436155-53442870 Solanum lycopersicum
Solyc11g068830.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 53440871-53442870 Solanum lycopersicum
Solyc11g068830.1 5.0kb upstream 5.0kb upstream 9716 true SL2.50ch11: 53431155-53440870 Solanum lycopersicum
Solyc11g068830.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 53431155-53436154 Solanum lycopersicum
Solyc11g068830.1 5.0kb downstream 5.0kb downstream 9716 true SL2.50ch11: 53436155-53445870 Solanum lycopersicum
Solyc11g068830.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 53440871-53445870 Solanum lycopersicum
Solyc11g068830.1 10.0kb upstream 10.0kb upstream 14716 true SL2.50ch11: 53426155-53440870 Solanum lycopersicum
Solyc11g068830.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 53426155-53436154 Solanum lycopersicum
Solyc11g068830.1 10.0kb downstream 10.0kb downstream 14716 true SL2.50ch11: 53436155-53450870 Solanum lycopersicum
Solyc11g068830.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 53440871-53450870 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470000 5263 Asterids View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain