Gene : Solyc11g067210.1 S. lycopersicum ITAG2.4
Defline:  (1 of 67) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7LJ24_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  1973 Name:  ? Solyc11g067210.1
Secondary Identifier:  ? PAC:36153168
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g067210.1 0.5kb upstream 0.5kb upstream 3116 true SL2.50ch11: 52965703-52968818 Solanum lycopersicum
Solyc11g067210.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 52965703-52966202 Solanum lycopersicum
Solyc11g067210.1 0.5kb downstream 0.5kb downstream 3116 true SL2.50ch11: 52966203-52969318 Solanum lycopersicum
Solyc11g067210.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 52968819-52969318 Solanum lycopersicum
Solyc11g067210.1 1.0kb upstream 1.0kb upstream 3616 true SL2.50ch11: 52965203-52968818 Solanum lycopersicum
Solyc11g067210.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 52965203-52966202 Solanum lycopersicum
Solyc11g067210.1 1.0kb downstream 1.0kb downstream 3616 true SL2.50ch11: 52966203-52969818 Solanum lycopersicum
Solyc11g067210.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 52968819-52969818 Solanum lycopersicum
Solyc11g067210.1 2.0kb upstream 2.0kb upstream 4616 true SL2.50ch11: 52964203-52968818 Solanum lycopersicum
Solyc11g067210.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 52964203-52966202 Solanum lycopersicum
Solyc11g067210.1 2.0kb downstream 2.0kb downstream 4616 true SL2.50ch11: 52966203-52970818 Solanum lycopersicum
Solyc11g067210.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 52968819-52970818 Solanum lycopersicum
Solyc11g067210.1 5.0kb upstream 5.0kb upstream 7616 true SL2.50ch11: 52961203-52968818 Solanum lycopersicum
Solyc11g067210.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 52961203-52966202 Solanum lycopersicum
Solyc11g067210.1 5.0kb downstream 5.0kb downstream 7616 true SL2.50ch11: 52966203-52973818 Solanum lycopersicum
Solyc11g067210.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 52968819-52973818 Solanum lycopersicum
Solyc11g067210.1 10.0kb upstream 10.0kb upstream 12616 true SL2.50ch11: 52956203-52968818 Solanum lycopersicum
Solyc11g067210.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 52956203-52966202 Solanum lycopersicum
Solyc11g067210.1 10.0kb downstream 10.0kb downstream 12616 true SL2.50ch11: 52966203-52978818 Solanum lycopersicum
Solyc11g067210.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 52968819-52978818 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474406 5263 Asterids View MSA
123746563 5271 Pentapetalae View MSA
122790377 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain