Gene : Solyc11g068460.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10183//PTHR10183:SF299 - CALPAIN // SUBFAMILY NOT NAMED Description:  Calpain-2 catalytic subunit (AHRD V1 *--- CAN2_MOUSE); contains Interpro domain(s) IPR011992 EF-Hand type
Genomic Order:  1999 Name:  ? Solyc11g068460.1
Secondary Identifier:  ? PAC:36152871
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g068460.1 0.5kb upstream 0.5kb upstream 3822 true SL2.50ch11: 53180764-53184585 Solanum lycopersicum
Solyc11g068460.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 53184086-53184585 Solanum lycopersicum
Solyc11g068460.1 0.5kb downstream 0.5kb downstream 3822 true SL2.50ch11: 53180264-53184085 Solanum lycopersicum
Solyc11g068460.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 53180264-53180763 Solanum lycopersicum
Solyc11g068460.1 1.0kb upstream 1.0kb upstream 4322 true SL2.50ch11: 53180764-53185085 Solanum lycopersicum
Solyc11g068460.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 53184086-53185085 Solanum lycopersicum
Solyc11g068460.1 1.0kb downstream 1.0kb downstream 4322 true SL2.50ch11: 53179764-53184085 Solanum lycopersicum
Solyc11g068460.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 53179764-53180763 Solanum lycopersicum
Solyc11g068460.1 2.0kb upstream 2.0kb upstream 5322 true SL2.50ch11: 53180764-53186085 Solanum lycopersicum
Solyc11g068460.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 53184086-53186085 Solanum lycopersicum
Solyc11g068460.1 2.0kb downstream 2.0kb downstream 5322 true SL2.50ch11: 53178764-53184085 Solanum lycopersicum
Solyc11g068460.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 53178764-53180763 Solanum lycopersicum
Solyc11g068460.1 5.0kb upstream 5.0kb upstream 8322 true SL2.50ch11: 53180764-53189085 Solanum lycopersicum
Solyc11g068460.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 53184086-53189085 Solanum lycopersicum
Solyc11g068460.1 5.0kb downstream 5.0kb downstream 8322 true SL2.50ch11: 53175764-53184085 Solanum lycopersicum
Solyc11g068460.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 53175764-53180763 Solanum lycopersicum
Solyc11g068460.1 10.0kb upstream 10.0kb upstream 13322 true SL2.50ch11: 53180764-53194085 Solanum lycopersicum
Solyc11g068460.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 53184086-53194085 Solanum lycopersicum
Solyc11g068460.1 10.0kb downstream 10.0kb downstream 13322 true SL2.50ch11: 53170764-53184085 Solanum lycopersicum
Solyc11g068460.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 53170764-53180763 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470176 5263 Asterids View MSA
123744145 5271 Pentapetalae View MSA
122790435 5272 Eudicot View MSA
122044402 5273 Angiosperm View MSA
121345695 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain