Gene : Solyc11g068540.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 3.5.1.53 - N-carbamoylputrescine amidase Description:  N-carbamoylputrescine amidase (AHRD V1 **-- D3NU88_AZOS1); contains Interpro domain(s) IPR003010 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase IPR017755 N-carbamoylputrescine amidase
Genomic Order:  2007 Name:  ? Solyc11g068540.1
Secondary Identifier:  ? PAC:36153726
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum POLYAMINSYN3-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-43 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g068540.1 0.5kb upstream 0.5kb upstream 6750 true SL2.50ch11: 53230361-53237110 Solanum lycopersicum
Solyc11g068540.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 53236611-53237110 Solanum lycopersicum
Solyc11g068540.1 0.5kb downstream 0.5kb downstream 6750 true SL2.50ch11: 53229861-53236610 Solanum lycopersicum
Solyc11g068540.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 53229861-53230360 Solanum lycopersicum
Solyc11g068540.1 1.0kb upstream 1.0kb upstream 7250 true SL2.50ch11: 53230361-53237610 Solanum lycopersicum
Solyc11g068540.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 53236611-53237610 Solanum lycopersicum
Solyc11g068540.1 1.0kb downstream 1.0kb downstream 7250 true SL2.50ch11: 53229361-53236610 Solanum lycopersicum
Solyc11g068540.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 53229361-53230360 Solanum lycopersicum
Solyc11g068540.1 2.0kb upstream 2.0kb upstream 8250 true SL2.50ch11: 53230361-53238610 Solanum lycopersicum
Solyc11g068540.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 53236611-53238610 Solanum lycopersicum
Solyc11g068540.1 2.0kb downstream 2.0kb downstream 8250 true SL2.50ch11: 53228361-53236610 Solanum lycopersicum
Solyc11g068540.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 53228361-53230360 Solanum lycopersicum
Solyc11g068540.1 5.0kb upstream 5.0kb upstream 11250 true SL2.50ch11: 53230361-53241610 Solanum lycopersicum
Solyc11g068540.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 53236611-53241610 Solanum lycopersicum
Solyc11g068540.1 5.0kb downstream 5.0kb downstream 11250 true SL2.50ch11: 53225361-53236610 Solanum lycopersicum
Solyc11g068540.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 53225361-53230360 Solanum lycopersicum
Solyc11g068540.1 10.0kb upstream 10.0kb upstream 16250 true SL2.50ch11: 53230361-53246610 Solanum lycopersicum
Solyc11g068540.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 53236611-53246610 Solanum lycopersicum
Solyc11g068540.1 10.0kb downstream 10.0kb downstream 16250 true SL2.50ch11: 53220361-53236610 Solanum lycopersicum
Solyc11g068540.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 53220361-53230360 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475076 5263 Asterids View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain