Gene : Solyc11g073130.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Description:  Protein tyrosine phosphatase 1B (AHRD V1 *-*- D9IVF2_STRIE); contains Interpro domain(s) IPR007482 Protein-tyrosine phosphatase-like, PTPLA
Genomic Order:  2367 Name:  ? Solyc11g073130.1
Secondary Identifier:  ? PAC:36153034
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5080 Solanum lycopersicum pathologic  
Slycopersicum PWY-6433 Solanum lycopersicum pathologic  
Slycopersicum PWY-6598 Solanum lycopersicum pathologic  
Slycopersicum PWY-7036 Solanum lycopersicum pathologic  
Slycopersicum PWY-7601 Solanum lycopersicum pathologic  
Slycopersicum PWY-7606 Solanum lycopersicum pathologic  
Slycopersicum PWY-7619 Solanum lycopersicum pathologic  
Slycopersicum PWY-7726 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g073130.1 0.5kb upstream 0.5kb upstream 4825 true SL2.50ch11: 56216559-56221383 Solanum lycopersicum
Solyc11g073130.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 56216559-56217058 Solanum lycopersicum
Solyc11g073130.1 0.5kb downstream 0.5kb downstream 4825 true SL2.50ch11: 56217059-56221883 Solanum lycopersicum
Solyc11g073130.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 56221384-56221883 Solanum lycopersicum
Solyc11g073130.1 1.0kb upstream 1.0kb upstream 5325 true SL2.50ch11: 56216059-56221383 Solanum lycopersicum
Solyc11g073130.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 56216059-56217058 Solanum lycopersicum
Solyc11g073130.1 1.0kb downstream 1.0kb downstream 5325 true SL2.50ch11: 56217059-56222383 Solanum lycopersicum
Solyc11g073130.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 56221384-56222383 Solanum lycopersicum
Solyc11g073130.1 2.0kb upstream 2.0kb upstream 6325 true SL2.50ch11: 56215059-56221383 Solanum lycopersicum
Solyc11g073130.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 56215059-56217058 Solanum lycopersicum
Solyc11g073130.1 2.0kb downstream 2.0kb downstream 6325 true SL2.50ch11: 56217059-56223383 Solanum lycopersicum
Solyc11g073130.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 56221384-56223383 Solanum lycopersicum
Solyc11g073130.1 5.0kb upstream 5.0kb upstream 9325 true SL2.50ch11: 56212059-56221383 Solanum lycopersicum
Solyc11g073130.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 56212059-56217058 Solanum lycopersicum
Solyc11g073130.1 5.0kb downstream 5.0kb downstream 9325 true SL2.50ch11: 56217059-56226383 Solanum lycopersicum
Solyc11g073130.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 56221384-56226383 Solanum lycopersicum
Solyc11g073130.1 10.0kb upstream 10.0kb upstream 14325 true SL2.50ch11: 56207059-56221383 Solanum lycopersicum
Solyc11g073130.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 56207059-56217058 Solanum lycopersicum
Solyc11g073130.1 10.0kb downstream 10.0kb downstream 14325 true SL2.50ch11: 56217059-56231383 Solanum lycopersicum
Solyc11g073130.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 56221384-56231383 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474196 5263 Asterids View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain