Gene : Solyc11g072880.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR24093:SF289 - CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED Description:  Calcium-transporting ATPase (AHRD V1 ***- A8NHF4_COPC7); contains Interpro domain(s) IPR005782 ATPase, P-type, calcium-transporting
Genomic Order:  2342 Name:  ? Solyc11g072880.1
Secondary Identifier:  ? PAC:36153727
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g072880.1 0.5kb upstream 0.5kb upstream 5696 true SL2.50ch11: 56047840-56053535 Solanum lycopersicum
Solyc11g072880.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 56053036-56053535 Solanum lycopersicum
Solyc11g072880.1 0.5kb downstream 0.5kb downstream 5696 true SL2.50ch11: 56047340-56053035 Solanum lycopersicum
Solyc11g072880.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 56047340-56047839 Solanum lycopersicum
Solyc11g072880.1 1.0kb upstream 1.0kb upstream 6196 true SL2.50ch11: 56047840-56054035 Solanum lycopersicum
Solyc11g072880.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 56053036-56054035 Solanum lycopersicum
Solyc11g072880.1 1.0kb downstream 1.0kb downstream 6196 true SL2.50ch11: 56046840-56053035 Solanum lycopersicum
Solyc11g072880.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 56046840-56047839 Solanum lycopersicum
Solyc11g072880.1 2.0kb upstream 2.0kb upstream 7196 true SL2.50ch11: 56047840-56055035 Solanum lycopersicum
Solyc11g072880.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 56053036-56055035 Solanum lycopersicum
Solyc11g072880.1 2.0kb downstream 2.0kb downstream 7196 true SL2.50ch11: 56045840-56053035 Solanum lycopersicum
Solyc11g072880.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 56045840-56047839 Solanum lycopersicum
Solyc11g072880.1 5.0kb upstream 5.0kb upstream 10196 true SL2.50ch11: 56047840-56058035 Solanum lycopersicum
Solyc11g072880.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 56053036-56058035 Solanum lycopersicum
Solyc11g072880.1 5.0kb downstream 5.0kb downstream 10196 true SL2.50ch11: 56042840-56053035 Solanum lycopersicum
Solyc11g072880.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 56042840-56047839 Solanum lycopersicum
Solyc11g072880.1 10.0kb upstream 10.0kb upstream 15196 true SL2.50ch11: 56047840-56063035 Solanum lycopersicum
Solyc11g072880.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 56053036-56063035 Solanum lycopersicum
Solyc11g072880.1 10.0kb downstream 10.0kb downstream 15196 true SL2.50ch11: 56037840-56053035 Solanum lycopersicum
Solyc11g072880.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 56037840-56047839 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476798 5263 Asterids View MSA
123740324 5271 Pentapetalae View MSA
122794495 5272 Eudicot View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain