Gene : Solyc11g072150.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // SUBFAMILY NOT NAMED Description:  Nuclear transcription factor Y subunit C-1 (AHRD V1 *--- B6SWV5_MAIZE); contains Interpro domain(s) IPR003958 Transcription factor CBF/NF-Y/archaeal histone
Genomic Order:  2269 Name:  ? Solyc11g072150.1
Secondary Identifier:  ? PAC:36151548
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g072150.1 0.5kb upstream 0.5kb upstream 4494 true SL2.50ch11: 55385632-55390125 Solanum lycopersicum
Solyc11g072150.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 55389626-55390125 Solanum lycopersicum
Solyc11g072150.1 0.5kb downstream 0.5kb downstream 4494 true SL2.50ch11: 55385132-55389625 Solanum lycopersicum
Solyc11g072150.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 55385132-55385631 Solanum lycopersicum
Solyc11g072150.1 1.0kb upstream 1.0kb upstream 4994 true SL2.50ch11: 55385632-55390625 Solanum lycopersicum
Solyc11g072150.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 55389626-55390625 Solanum lycopersicum
Solyc11g072150.1 1.0kb downstream 1.0kb downstream 4994 true SL2.50ch11: 55384632-55389625 Solanum lycopersicum
Solyc11g072150.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 55384632-55385631 Solanum lycopersicum
Solyc11g072150.1 2.0kb upstream 2.0kb upstream 5994 true SL2.50ch11: 55385632-55391625 Solanum lycopersicum
Solyc11g072150.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 55389626-55391625 Solanum lycopersicum
Solyc11g072150.1 2.0kb downstream 2.0kb downstream 5994 true SL2.50ch11: 55383632-55389625 Solanum lycopersicum
Solyc11g072150.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 55383632-55385631 Solanum lycopersicum
Solyc11g072150.1 5.0kb upstream 5.0kb upstream 8994 true SL2.50ch11: 55385632-55394625 Solanum lycopersicum
Solyc11g072150.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 55389626-55394625 Solanum lycopersicum
Solyc11g072150.1 5.0kb downstream 5.0kb downstream 8994 true SL2.50ch11: 55380632-55389625 Solanum lycopersicum
Solyc11g072150.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 55380632-55385631 Solanum lycopersicum
Solyc11g072150.1 10.0kb upstream 10.0kb upstream 13994 true SL2.50ch11: 55385632-55399625 Solanum lycopersicum
Solyc11g072150.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 55389626-55399625 Solanum lycopersicum
Solyc11g072150.1 10.0kb downstream 10.0kb downstream 13994 true SL2.50ch11: 55375632-55389625 Solanum lycopersicum
Solyc11g072150.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 55375632-55385631 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475523 5263 Asterids View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain