Gene : Solyc11g072160.1 S. lycopersicum ITAG2.4
Description:  Ubiquitin-associated /TS-N domain-containing protein (AHRD V1 ***- D7LFE2_ARALY); contains Interpro domain(s) IPR009060 UBA-like Genomic Order:  2270
Name:  ? Solyc11g072160.1 Secondary Identifier:  ? PAC:36152095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g072160.1 0.5kb upstream 0.5kb upstream 2705 true SL2.50ch11: 55397271-55399975 Solanum lycopersicum
Solyc11g072160.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 55397271-55397770 Solanum lycopersicum
Solyc11g072160.1 0.5kb downstream 0.5kb downstream 2705 true SL2.50ch11: 55397771-55400475 Solanum lycopersicum
Solyc11g072160.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 55399976-55400475 Solanum lycopersicum
Solyc11g072160.1 1.0kb upstream 1.0kb upstream 3205 true SL2.50ch11: 55396771-55399975 Solanum lycopersicum
Solyc11g072160.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 55396771-55397770 Solanum lycopersicum
Solyc11g072160.1 1.0kb downstream 1.0kb downstream 3205 true SL2.50ch11: 55397771-55400975 Solanum lycopersicum
Solyc11g072160.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 55399976-55400975 Solanum lycopersicum
Solyc11g072160.1 2.0kb upstream 2.0kb upstream 4205 true SL2.50ch11: 55395771-55399975 Solanum lycopersicum
Solyc11g072160.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 55395771-55397770 Solanum lycopersicum
Solyc11g072160.1 2.0kb downstream 2.0kb downstream 4205 true SL2.50ch11: 55397771-55401975 Solanum lycopersicum
Solyc11g072160.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 55399976-55401975 Solanum lycopersicum
Solyc11g072160.1 5.0kb upstream 5.0kb upstream 7205 true SL2.50ch11: 55392771-55399975 Solanum lycopersicum
Solyc11g072160.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 55392771-55397770 Solanum lycopersicum
Solyc11g072160.1 5.0kb downstream 5.0kb downstream 7205 true SL2.50ch11: 55397771-55404975 Solanum lycopersicum
Solyc11g072160.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 55399976-55404975 Solanum lycopersicum
Solyc11g072160.1 10.0kb upstream 10.0kb upstream 12205 true SL2.50ch11: 55387771-55399975 Solanum lycopersicum
Solyc11g072160.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 55387771-55397770 Solanum lycopersicum
Solyc11g072160.1 10.0kb downstream 10.0kb downstream 12205 true SL2.50ch11: 55397771-55409975 Solanum lycopersicum
Solyc11g072160.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 55399976-55409975 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121386746 5263 Asterids View MSA
123746893 5271 Pentapetalae View MSA
122791489 5272 Eudicot View MSA
122045996 5273 Angiosperm View MSA
121344407 5274 Embryophyte View MSA
123380038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain