Gene : Solyc00g019740.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K02109//K02262 - F-type H+-transporting ATPase subunit b (ATPF0B, atpF) // cytochrome c oxidase subunit 3 (COX3) Description:  ATPase subunit 8 (AHRD V1 ***- B6VJW7_VITVI); contains Interpro domain(s) IPR003319 ATPase, F0 complex, subunit 8, mitochondrial, plant
Genomic Order:  289 Name:  ? Solyc00g019740.1
Secondary Identifier:  ? PAC:36128077
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6126 Solanum lycopersicum pathologic  
Slycopersicum PWY-7219 Solanum lycopersicum pathologic  
Slycopersicum PWY-7229 Solanum lycopersicum pathologic  
Slycopersicum PWY-841 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g019740.1 0.5kb upstream 0.5kb upstream 971 true SL2.50ch00: 11783615-11784585 Solanum lycopersicum
Solyc00g019740.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 11784086-11784585 Solanum lycopersicum
Solyc00g019740.1 0.5kb downstream 0.5kb downstream 971 true SL2.50ch00: 11783115-11784085 Solanum lycopersicum
Solyc00g019740.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 11783115-11783614 Solanum lycopersicum
Solyc00g019740.1 1.0kb upstream 1.0kb upstream 1471 true SL2.50ch00: 11783615-11785085 Solanum lycopersicum
Solyc00g019740.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 11784086-11785085 Solanum lycopersicum
Solyc00g019740.1 1.0kb downstream 1.0kb downstream 1471 true SL2.50ch00: 11782615-11784085 Solanum lycopersicum
Solyc00g019740.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 11782615-11783614 Solanum lycopersicum
Solyc00g019740.1 2.0kb upstream 2.0kb upstream 2471 true SL2.50ch00: 11783615-11786085 Solanum lycopersicum
Solyc00g019740.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 11784086-11786085 Solanum lycopersicum
Solyc00g019740.1 2.0kb downstream 2.0kb downstream 2471 true SL2.50ch00: 11781615-11784085 Solanum lycopersicum
Solyc00g019740.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 11781615-11783614 Solanum lycopersicum
Solyc00g019740.1 5.0kb upstream 5.0kb upstream 5471 true SL2.50ch00: 11783615-11789085 Solanum lycopersicum
Solyc00g019740.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 11784086-11789085 Solanum lycopersicum
Solyc00g019740.1 5.0kb downstream 5.0kb downstream 5471 true SL2.50ch00: 11778615-11784085 Solanum lycopersicum
Solyc00g019740.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 11778615-11783614 Solanum lycopersicum
Solyc00g019740.1 10.0kb upstream 10.0kb upstream 10471 true SL2.50ch00: 11783615-11794085 Solanum lycopersicum
Solyc00g019740.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 11784086-11794085 Solanum lycopersicum
Solyc00g019740.1 10.0kb downstream 10.0kb downstream 10471 true SL2.50ch00: 11773615-11784085 Solanum lycopersicum
Solyc00g019740.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 11773615-11783614 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028540 5273 Angiosperm View MSA
121480922 5263 Asterids View MSA
123742856 5271 Pentapetalae View MSA
122795419 5272 Eudicot View MSA
121348300 5274 Embryophyte View MSA
123380809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain