Gene : Solyc00g012640.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR23068//PTHR23068:SF12 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED // SUBFAMILY NOT NAMED Description:  DNA (cytosine-5)-methyltransferase DRM2 (AHRD V1 **** DRM2_ARATH); contains Interpro domain(s) IPR009060 UBA-like
Genomic Order:  209 Name:  ? Solyc00g012640.1
Secondary Identifier:  ? PAC:36127679
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g012640.1 0.5kb upstream 0.5kb upstream 5516 true SL2.50ch00: 10544430-10549945 Solanum lycopersicum
Solyc00g012640.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 10549446-10549945 Solanum lycopersicum
Solyc00g012640.1 0.5kb downstream 0.5kb downstream 5516 true SL2.50ch00: 10543930-10549445 Solanum lycopersicum
Solyc00g012640.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 10543930-10544429 Solanum lycopersicum
Solyc00g012640.1 1.0kb upstream 1.0kb upstream 6016 true SL2.50ch00: 10544430-10550445 Solanum lycopersicum
Solyc00g012640.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 10549446-10550445 Solanum lycopersicum
Solyc00g012640.1 1.0kb downstream 1.0kb downstream 6016 true SL2.50ch00: 10543430-10549445 Solanum lycopersicum
Solyc00g012640.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 10543430-10544429 Solanum lycopersicum
Solyc00g012640.1 2.0kb upstream 2.0kb upstream 7016 true SL2.50ch00: 10544430-10551445 Solanum lycopersicum
Solyc00g012640.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 10549446-10551445 Solanum lycopersicum
Solyc00g012640.1 2.0kb downstream 2.0kb downstream 7016 true SL2.50ch00: 10542430-10549445 Solanum lycopersicum
Solyc00g012640.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 10542430-10544429 Solanum lycopersicum
Solyc00g012640.1 5.0kb upstream 5.0kb upstream 10016 true SL2.50ch00: 10544430-10554445 Solanum lycopersicum
Solyc00g012640.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 10549446-10554445 Solanum lycopersicum
Solyc00g012640.1 5.0kb downstream 5.0kb downstream 10016 true SL2.50ch00: 10539430-10549445 Solanum lycopersicum
Solyc00g012640.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 10539430-10544429 Solanum lycopersicum
Solyc00g012640.1 10.0kb upstream 10.0kb upstream 15016 true SL2.50ch00: 10544430-10559445 Solanum lycopersicum
Solyc00g012640.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 10549446-10559445 Solanum lycopersicum
Solyc00g012640.1 10.0kb downstream 10.0kb downstream 15016 true SL2.50ch00: 10534430-10549445 Solanum lycopersicum
Solyc00g012640.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 10534430-10544429 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121363868 5263 Asterids Singleton cluster - no MSA
123745189 5271 Pentapetalae View MSA
122788994 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain