Gene : Solyc00g007260.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12606//PTHR12606:SF38 - SENTRIN/SUMO-SPECIFIC PROTEASE // SUBFAMILY NOT NAMED Description:  Sentrin-specific protease 7 (AHRD V1 *-*- SENP7_HUMAN); contains Interpro domain(s) IPR003653 Peptidase C48, SUMO/Sentrin/Ubl1
Genomic Order:  98 Name:  ? Solyc00g007260.2
Secondary Identifier:  ? PAC:36128423
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g007260.2 0.5kb upstream 0.5kb upstream 5009 true SL2.50ch00: 6895513-6900521 Solanum lycopersicum
Solyc00g007260.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 6895513-6896012 Solanum lycopersicum
Solyc00g007260.2 0.5kb downstream 0.5kb downstream 5009 true SL2.50ch00: 6896013-6901021 Solanum lycopersicum
Solyc00g007260.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 6900522-6901021 Solanum lycopersicum
Solyc00g007260.2 1.0kb upstream 1.0kb upstream 5509 true SL2.50ch00: 6895013-6900521 Solanum lycopersicum
Solyc00g007260.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 6895013-6896012 Solanum lycopersicum
Solyc00g007260.2 1.0kb downstream 1.0kb downstream 5509 true SL2.50ch00: 6896013-6901521 Solanum lycopersicum
Solyc00g007260.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 6900522-6901521 Solanum lycopersicum
Solyc00g007260.2 2.0kb upstream 2.0kb upstream 6509 true SL2.50ch00: 6894013-6900521 Solanum lycopersicum
Solyc00g007260.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 6894013-6896012 Solanum lycopersicum
Solyc00g007260.2 2.0kb downstream 2.0kb downstream 6509 true SL2.50ch00: 6896013-6902521 Solanum lycopersicum
Solyc00g007260.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 6900522-6902521 Solanum lycopersicum
Solyc00g007260.2 5.0kb upstream 5.0kb upstream 9509 true SL2.50ch00: 6891013-6900521 Solanum lycopersicum
Solyc00g007260.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 6891013-6896012 Solanum lycopersicum
Solyc00g007260.2 5.0kb downstream 5.0kb downstream 9509 true SL2.50ch00: 6896013-6905521 Solanum lycopersicum
Solyc00g007260.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 6900522-6905521 Solanum lycopersicum
Solyc00g007260.2 10.0kb upstream 10.0kb upstream 14509 true SL2.50ch00: 6886013-6900521 Solanum lycopersicum
Solyc00g007260.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 6886013-6896012 Solanum lycopersicum
Solyc00g007260.2 10.0kb downstream 10.0kb downstream 14509 true SL2.50ch00: 6896013-6910521 Solanum lycopersicum
Solyc00g007260.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 6900522-6910521 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480457 5263 Asterids View MSA
123753730 5271 Pentapetalae View MSA
122794426 5272 Eudicot View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain