Gene : Solyc00g007120.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR11216:SF72 - CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Description:  Calcium-binding EF hand family protein (AHRD V1 ***- D7KK32_ARALY); contains Interpro domain(s) IPR011992 EF-Hand type
Genomic Order:  84 Name:  ? Solyc00g007120.2
Secondary Identifier:  ? PAC:36127847
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g007120.2 0.5kb upstream 0.5kb upstream 11006 true SL2.50ch00: 6727455-6738460 Solanum lycopersicum
Solyc00g007120.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 6727455-6727954 Solanum lycopersicum
Solyc00g007120.2 0.5kb downstream 0.5kb downstream 11006 true SL2.50ch00: 6727955-6738960 Solanum lycopersicum
Solyc00g007120.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 6738461-6738960 Solanum lycopersicum
Solyc00g007120.2 1.0kb upstream 1.0kb upstream 11506 true SL2.50ch00: 6726955-6738460 Solanum lycopersicum
Solyc00g007120.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 6726955-6727954 Solanum lycopersicum
Solyc00g007120.2 1.0kb downstream 1.0kb downstream 11506 true SL2.50ch00: 6727955-6739460 Solanum lycopersicum
Solyc00g007120.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 6738461-6739460 Solanum lycopersicum
Solyc00g007120.2 2.0kb upstream 2.0kb upstream 12506 true SL2.50ch00: 6725955-6738460 Solanum lycopersicum
Solyc00g007120.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 6725955-6727954 Solanum lycopersicum
Solyc00g007120.2 2.0kb downstream 2.0kb downstream 12506 true SL2.50ch00: 6727955-6740460 Solanum lycopersicum
Solyc00g007120.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 6738461-6740460 Solanum lycopersicum
Solyc00g007120.2 5.0kb upstream 5.0kb upstream 15506 true SL2.50ch00: 6722955-6738460 Solanum lycopersicum
Solyc00g007120.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 6722955-6727954 Solanum lycopersicum
Solyc00g007120.2 5.0kb downstream 5.0kb downstream 15506 true SL2.50ch00: 6727955-6743460 Solanum lycopersicum
Solyc00g007120.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 6738461-6743460 Solanum lycopersicum
Solyc00g007120.2 10.0kb upstream 10.0kb upstream 20506 true SL2.50ch00: 6717955-6738460 Solanum lycopersicum
Solyc00g007120.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 6717955-6727954 Solanum lycopersicum
Solyc00g007120.2 10.0kb downstream 10.0kb downstream 20506 true SL2.50ch00: 6727955-6748460 Solanum lycopersicum
Solyc00g007120.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 6738461-6748460 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121363969 5263 Asterids Singleton cluster - no MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain