Gene : Solyc00g125270.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11019:SF115 - PROTEIN YHBO Description:  Intracellular protease PfpI family (AHRD V1 *--- D2M9T3_RHOPA); contains Interpro domain(s) IPR002818 ThiJ/PfpI
Genomic Order:  678 Name:  ? Solyc00g125270.1
Secondary Identifier:  ? PAC:36128296
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g125270.1 0.5kb upstream 0.5kb upstream 1387 true SL2.50ch00: 16614939-16616325 Solanum lycopersicum
Solyc00g125270.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 16614939-16615438 Solanum lycopersicum
Solyc00g125270.1 0.5kb downstream 0.5kb downstream 1387 true SL2.50ch00: 16615439-16616825 Solanum lycopersicum
Solyc00g125270.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 16616326-16616825 Solanum lycopersicum
Solyc00g125270.1 1.0kb upstream 1.0kb upstream 1887 true SL2.50ch00: 16614439-16616325 Solanum lycopersicum
Solyc00g125270.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 16614439-16615438 Solanum lycopersicum
Solyc00g125270.1 1.0kb downstream 1.0kb downstream 1887 true SL2.50ch00: 16615439-16617325 Solanum lycopersicum
Solyc00g125270.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 16616326-16617325 Solanum lycopersicum
Solyc00g125270.1 2.0kb upstream 2.0kb upstream 2887 true SL2.50ch00: 16613439-16616325 Solanum lycopersicum
Solyc00g125270.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 16613439-16615438 Solanum lycopersicum
Solyc00g125270.1 2.0kb downstream 2.0kb downstream 2887 true SL2.50ch00: 16615439-16618325 Solanum lycopersicum
Solyc00g125270.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 16616326-16618325 Solanum lycopersicum
Solyc00g125270.1 5.0kb upstream 5.0kb upstream 5887 true SL2.50ch00: 16610439-16616325 Solanum lycopersicum
Solyc00g125270.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 16610439-16615438 Solanum lycopersicum
Solyc00g125270.1 5.0kb downstream 5.0kb downstream 5887 true SL2.50ch00: 16615439-16621325 Solanum lycopersicum
Solyc00g125270.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 16616326-16621325 Solanum lycopersicum
Solyc00g125270.1 10.0kb upstream 10.0kb upstream 10887 true SL2.50ch00: 16605439-16616325 Solanum lycopersicum
Solyc00g125270.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 16605439-16615438 Solanum lycopersicum
Solyc00g125270.1 10.0kb downstream 10.0kb downstream 10887 true SL2.50ch00: 16615439-16626325 Solanum lycopersicum
Solyc00g125270.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 16616326-16626325 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121692194 5273 Angiosperm Singleton cluster - no MSA
121364228 5263 Asterids Singleton cluster - no MSA
123648265 5271 Pentapetalae Singleton cluster - no MSA
122682206 5272 Eudicot Singleton cluster - no MSA
120964024 5274 Embryophyte Singleton cluster - no MSA
123004345 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain