Gene : Solyc00g090110.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase Description:  UDP-3-O- (AHRD V1 ***- C6BEH6_RALP1); contains Interpro domain(s) IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase
Genomic Order:  568 Name:  ? Solyc00g090110.1
Secondary Identifier:  ? PAC:36127790
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum NAGLIPASYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g090110.1 0.5kb upstream 0.5kb upstream 1418 true SL2.50ch00: 15372036-15373453 Solanum lycopersicum
Solyc00g090110.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 15372036-15372535 Solanum lycopersicum
Solyc00g090110.1 0.5kb downstream 0.5kb downstream 1418 true SL2.50ch00: 15372536-15373953 Solanum lycopersicum
Solyc00g090110.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 15373454-15373953 Solanum lycopersicum
Solyc00g090110.1 1.0kb upstream 1.0kb upstream 1918 true SL2.50ch00: 15371536-15373453 Solanum lycopersicum
Solyc00g090110.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 15371536-15372535 Solanum lycopersicum
Solyc00g090110.1 1.0kb downstream 1.0kb downstream 1918 true SL2.50ch00: 15372536-15374453 Solanum lycopersicum
Solyc00g090110.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 15373454-15374453 Solanum lycopersicum
Solyc00g090110.1 2.0kb upstream 2.0kb upstream 2918 true SL2.50ch00: 15370536-15373453 Solanum lycopersicum
Solyc00g090110.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 15370536-15372535 Solanum lycopersicum
Solyc00g090110.1 2.0kb downstream 2.0kb downstream 2918 true SL2.50ch00: 15372536-15375453 Solanum lycopersicum
Solyc00g090110.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 15373454-15375453 Solanum lycopersicum
Solyc00g090110.1 5.0kb upstream 5.0kb upstream 5918 true SL2.50ch00: 15367536-15373453 Solanum lycopersicum
Solyc00g090110.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 15367536-15372535 Solanum lycopersicum
Solyc00g090110.1 5.0kb downstream 5.0kb downstream 5918 true SL2.50ch00: 15372536-15378453 Solanum lycopersicum
Solyc00g090110.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 15373454-15378453 Solanum lycopersicum
Solyc00g090110.1 10.0kb upstream 10.0kb upstream 10918 true SL2.50ch00: 15362536-15373453 Solanum lycopersicum
Solyc00g090110.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 15362536-15372535 Solanum lycopersicum
Solyc00g090110.1 10.0kb downstream 10.0kb downstream 10918 true SL2.50ch00: 15372536-15383453 Solanum lycopersicum
Solyc00g090110.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 15373454-15383453 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471613 5263 Asterids View MSA
123739136 5271 Pentapetalae View MSA
122793269 5272 Eudicot View MSA
122046520 5273 Angiosperm View MSA
121346728 5274 Embryophyte View MSA
123424011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain