Gene : Solyc00g040490.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR33978:SF2 - EXPRESSED PROTEIN Description:  Unknown Protein (AHRD V1)
Genomic Order:  450 Name:  ? Solyc00g040490.1
Secondary Identifier:  ? PAC:36127822
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g040490.1 0.5kb upstream 0.5kb upstream 869 true SL2.50ch00: 13163889-13164757 Solanum lycopersicum
Solyc00g040490.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 13163889-13164388 Solanum lycopersicum
Solyc00g040490.1 0.5kb downstream 0.5kb downstream 869 true SL2.50ch00: 13164389-13165257 Solanum lycopersicum
Solyc00g040490.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 13164758-13165257 Solanum lycopersicum
Solyc00g040490.1 1.0kb upstream 1.0kb upstream 1369 true SL2.50ch00: 13163389-13164757 Solanum lycopersicum
Solyc00g040490.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 13163389-13164388 Solanum lycopersicum
Solyc00g040490.1 1.0kb downstream 1.0kb downstream 1369 true SL2.50ch00: 13164389-13165757 Solanum lycopersicum
Solyc00g040490.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 13164758-13165757 Solanum lycopersicum
Solyc00g040490.1 2.0kb upstream 2.0kb upstream 2369 true SL2.50ch00: 13162389-13164757 Solanum lycopersicum
Solyc00g040490.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 13162389-13164388 Solanum lycopersicum
Solyc00g040490.1 2.0kb downstream 2.0kb downstream 2369 true SL2.50ch00: 13164389-13166757 Solanum lycopersicum
Solyc00g040490.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 13164758-13166757 Solanum lycopersicum
Solyc00g040490.1 5.0kb upstream 5.0kb upstream 5369 true SL2.50ch00: 13159389-13164757 Solanum lycopersicum
Solyc00g040490.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 13159389-13164388 Solanum lycopersicum
Solyc00g040490.1 5.0kb downstream 5.0kb downstream 5369 true SL2.50ch00: 13164389-13169757 Solanum lycopersicum
Solyc00g040490.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 13164758-13169757 Solanum lycopersicum
Solyc00g040490.1 10.0kb upstream 10.0kb upstream 10369 true SL2.50ch00: 13154389-13164757 Solanum lycopersicum
Solyc00g040490.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 13154389-13164388 Solanum lycopersicum
Solyc00g040490.1 10.0kb downstream 10.0kb downstream 10369 true SL2.50ch00: 13164389-13174757 Solanum lycopersicum
Solyc00g040490.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 13164758-13174757 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
121414390 5263 Asterids View MSA
123691127 5271 Pentapetalae View MSA
122724954 5272 Eudicot View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain