Gene : Solyc00g055950.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR26402:SF576 - PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB Description:  Response regulator receiver Transcriptional regulatory protein (AHRD V1 ***- B8CKL9_SHEPW); contains Interpro domain(s) IPR001789 Signal transduction response regulator, receiver region IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB
Genomic Order:  492 Name:  ? Solyc00g055950.1
Secondary Identifier:  ? PAC:36128109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g055950.1 0.5kb upstream 0.5kb upstream 1190 true SL2.50ch00: 13926555-13927744 Solanum lycopersicum
Solyc00g055950.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 13926555-13927054 Solanum lycopersicum
Solyc00g055950.1 0.5kb downstream 0.5kb downstream 1190 true SL2.50ch00: 13927055-13928244 Solanum lycopersicum
Solyc00g055950.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 13927745-13928244 Solanum lycopersicum
Solyc00g055950.1 1.0kb upstream 1.0kb upstream 1690 true SL2.50ch00: 13926055-13927744 Solanum lycopersicum
Solyc00g055950.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 13926055-13927054 Solanum lycopersicum
Solyc00g055950.1 1.0kb downstream 1.0kb downstream 1690 true SL2.50ch00: 13927055-13928744 Solanum lycopersicum
Solyc00g055950.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 13927745-13928744 Solanum lycopersicum
Solyc00g055950.1 2.0kb upstream 2.0kb upstream 2690 true SL2.50ch00: 13925055-13927744 Solanum lycopersicum
Solyc00g055950.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 13925055-13927054 Solanum lycopersicum
Solyc00g055950.1 2.0kb downstream 2.0kb downstream 2690 true SL2.50ch00: 13927055-13929744 Solanum lycopersicum
Solyc00g055950.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 13927745-13929744 Solanum lycopersicum
Solyc00g055950.1 5.0kb upstream 5.0kb upstream 5690 true SL2.50ch00: 13922055-13927744 Solanum lycopersicum
Solyc00g055950.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 13922055-13927054 Solanum lycopersicum
Solyc00g055950.1 5.0kb downstream 5.0kb downstream 5690 true SL2.50ch00: 13927055-13932744 Solanum lycopersicum
Solyc00g055950.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 13927745-13932744 Solanum lycopersicum
Solyc00g055950.1 10.0kb upstream 10.0kb upstream 10690 true SL2.50ch00: 13917055-13927744 Solanum lycopersicum
Solyc00g055950.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 13917055-13927054 Solanum lycopersicum
Solyc00g055950.1 10.0kb downstream 10.0kb downstream 10690 true SL2.50ch00: 13927055-13937744 Solanum lycopersicum
Solyc00g055950.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 13927745-13937744 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782574 5273 Angiosperm View MSA
121364122 5263 Asterids Singleton cluster - no MSA
123753250 5271 Pentapetalae View MSA
122775012 5272 Eudicot View MSA
121054085 5274 Embryophyte View MSA
123094083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain