Gene : AUR62006608 C. quinoa v1.0
Defline:  (1 of 2) PTHR30239//PTHR30239:SF6 - ACETOLACTATE SYNTHASE III, REGULATORY SUBUNIT // ACETOLACTATE SYNTHASE SMALL SUBUNIT 1, CHLOROPLASTIC Genomic Order:  131
Name:  ? AUR62006608 Secondary Identifier:  ? PAC:36302797
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa BRANCHED-CHAIN-AA-SYN-PWY Chenopodium quinoa pathologic  
Cquinoa ILEUSYN-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-3001 Chenopodium quinoa pathologic  
Cquinoa VALSYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62006608 0.5kb upstream 0.5kb upstream 8093 true C_Quinoa_Scaffold_3429: 3353904-3361996 Chenopodium quinoa
AUR62006608 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3429: 3361497-3361996 Chenopodium quinoa
AUR62006608 0.5kb downstream 0.5kb downstream 8093 true C_Quinoa_Scaffold_3429: 3353404-3361496 Chenopodium quinoa
AUR62006608 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3429: 3353404-3353903 Chenopodium quinoa
AUR62006608 1.0kb upstream 1.0kb upstream 8593 true C_Quinoa_Scaffold_3429: 3353904-3362496 Chenopodium quinoa
AUR62006608 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3429: 3361497-3362496 Chenopodium quinoa
AUR62006608 1.0kb downstream 1.0kb downstream 8593 true C_Quinoa_Scaffold_3429: 3352904-3361496 Chenopodium quinoa
AUR62006608 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3429: 3352904-3353903 Chenopodium quinoa
AUR62006608 2.0kb upstream 2.0kb upstream 9593 true C_Quinoa_Scaffold_3429: 3353904-3363496 Chenopodium quinoa
AUR62006608 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3429: 3361497-3363496 Chenopodium quinoa
AUR62006608 2.0kb downstream 2.0kb downstream 9593 true C_Quinoa_Scaffold_3429: 3351904-3361496 Chenopodium quinoa
AUR62006608 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3429: 3351904-3353903 Chenopodium quinoa
AUR62006608 5.0kb upstream 5.0kb upstream 12593 true C_Quinoa_Scaffold_3429: 3353904-3366496 Chenopodium quinoa
AUR62006608 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3429: 3361497-3366496 Chenopodium quinoa
AUR62006608 5.0kb downstream 5.0kb downstream 12593 true C_Quinoa_Scaffold_3429: 3348904-3361496 Chenopodium quinoa
AUR62006608 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3429: 3348904-3353903 Chenopodium quinoa
AUR62006608 10.0kb upstream 10.0kb upstream 17593 true C_Quinoa_Scaffold_3429: 3353904-3371496 Chenopodium quinoa
AUR62006608 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3429: 3361497-3371496 Chenopodium quinoa
AUR62006608 10.0kb downstream 10.0kb downstream 17593 true C_Quinoa_Scaffold_3429: 3343904-3361496 Chenopodium quinoa
AUR62006608 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3429: 3343904-3353903 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain