Gene : AUR62017696 C. quinoa v1.0
Defline:  (1 of 4) PTHR32010:SF6 - PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC Genomic Order:  213
Name:  ? AUR62017696 Secondary Identifier:  ? PAC:36291439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62017696 0.5kb upstream 0.5kb upstream 7569 true C_Quinoa_Scaffold_3458: 3165831-3173399 Chenopodium quinoa
AUR62017696 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3458: 3172900-3173399 Chenopodium quinoa
AUR62017696 0.5kb downstream 0.5kb downstream 7569 true C_Quinoa_Scaffold_3458: 3165331-3172899 Chenopodium quinoa
AUR62017696 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3458: 3165331-3165830 Chenopodium quinoa
AUR62017696 1.0kb upstream 1.0kb upstream 8069 true C_Quinoa_Scaffold_3458: 3165831-3173899 Chenopodium quinoa
AUR62017696 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3458: 3172900-3173899 Chenopodium quinoa
AUR62017696 1.0kb downstream 1.0kb downstream 8069 true C_Quinoa_Scaffold_3458: 3164831-3172899 Chenopodium quinoa
AUR62017696 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3458: 3164831-3165830 Chenopodium quinoa
AUR62017696 2.0kb upstream 2.0kb upstream 9069 true C_Quinoa_Scaffold_3458: 3165831-3174899 Chenopodium quinoa
AUR62017696 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3458: 3172900-3174899 Chenopodium quinoa
AUR62017696 2.0kb downstream 2.0kb downstream 9069 true C_Quinoa_Scaffold_3458: 3163831-3172899 Chenopodium quinoa
AUR62017696 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3458: 3163831-3165830 Chenopodium quinoa
AUR62017696 5.0kb upstream 5.0kb upstream 12069 true C_Quinoa_Scaffold_3458: 3165831-3177899 Chenopodium quinoa
AUR62017696 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3458: 3172900-3177899 Chenopodium quinoa
AUR62017696 5.0kb downstream 5.0kb downstream 12069 true C_Quinoa_Scaffold_3458: 3160831-3172899 Chenopodium quinoa
AUR62017696 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3458: 3160831-3165830 Chenopodium quinoa
AUR62017696 10.0kb upstream 10.0kb upstream 17069 true C_Quinoa_Scaffold_3458: 3165831-3182899 Chenopodium quinoa
AUR62017696 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3458: 3172900-3182899 Chenopodium quinoa
AUR62017696 10.0kb downstream 10.0kb downstream 17069 true C_Quinoa_Scaffold_3458: 3155831-3172899 Chenopodium quinoa
AUR62017696 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3458: 3155831-3165830 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123745532 5271 Pentapetalae View MSA
122793353 5272 Eudicot View MSA
122042393 5273 Angiosperm View MSA
121345735 5274 Embryophyte View MSA
123424958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain